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13_1_40cm_2_scaffold_3231

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3231_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..483
DNA (483bp) protein (161aa)
LPPG:FO 2-phospho-L-lactate transferase; K11212 LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-phospho-L-lactate transferase id=2338862 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LPPG:FO 2-phospho-L-lactate transferase
13_1_40cm_2_scaffold_3231_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

480..1214
DNA (735bp) protein (245aa)
2-phospho-L-lactate guanylyltransferase CofC; K14941 2-phospho-L-lactate guanylyltransferase [EC:2.7.7.68] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
2-phospho-L-lactate guanylyltransferase id=2615049 bin=GWC2_Methylomirabilis_70_24 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
2-phospho-L-lactate guanylyltransferase
13_1_40cm_2_scaffold_3231_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1219..1968
DNA (750bp) protein (250aa)
coenzyme F420-0 gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
coenzyme F420-0 gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] id=14628085 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
F420-dependent oxidoreductase
13_1_40cm_2_scaffold_3231_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1973..2617
DNA (645bp) protein (215aa)
NADPH-dependent F420 reductase; K06988 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
NADPH-dependent F420 reductase id=2338864 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NADPH-dependent F420 reductase
13_1_40cm_2_scaffold_3231_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2645..3193
DNA (549bp) protein (183aa)
malate dehydrogenase (EC:1.1.1.37)
malate/L-lactate dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Malate/L-lactate dehydrogenase id=2338865 bin=GWA2_Methylomirabilis_73_35 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_3231_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(3156..3602)
DNA (447bp) protein (149aa)
hypothetical protein id=2338870 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_3231_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3599..4288)
DNA (690bp) protein (230aa)
Hydrolase, haloacid dehalogenase-like family id=2338871 bin=GWA2_Methylomirabilis_73_35 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
haloacid dehalogenase domain-containing protein hydrolase Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_3231_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4477..5676)
DNA (1200bp) protein (400aa)
class V aminotransferase (EC:2.8.1.7); K04487 cysteine desulfurase [EC:2.8.1.7] Tax=GWA2_Rokubacteria_73_35_curated
Aminotransferase class V id=2338873 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cysteine desulfurase
13_1_40cm_2_scaffold_3231_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(5636..5872)
DNA (237bp) protein (79aa)
SirA family protein id=14626647 bin=bin7_NC10_sister species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
SirA family protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
SirA family protein
13_1_40cm_2_scaffold_3231_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

5931..6887
DNA (957bp) protein (319aa)
diguanylate cyclase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Diguanylate cyclase id=2338959 bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
diguanylate cyclase
13_1_40cm_2_scaffold_3231_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6889..7941
DNA (1053bp) protein (351aa)
response regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
response regulator receiver modulated metal dependent phosphohydrolase id=14626650 bin=bin7_NC10_sister species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
response regulator
13_1_40cm_2_scaffold_3231_12
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7952..8122)
DNA (171bp) protein (57aa)
NODE_6, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ98370.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lyso
Displaying 12 items

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