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13_1_40cm_2_scaffold_717

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_717_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

85..795
DNA (711bp) protein (237aa)
pdhR; GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_cura
transcriptional regulator id=14626765 bin=bin7_NC10_sister species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
GntR family transcriptional regulator
13_1_40cm_2_scaffold_717_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

799..2049
DNA (1251bp) protein (417aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=14626658 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_717_3
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2046..2852
DNA (807bp) protein (269aa)
glutamine ABC transporter substrate-binding protein n=1 Tax=Bacillus endophyticus RepID=UPI0002ED66F4
glnH; ABC transporter glutamine-binding protein GlnH precursor
Tax=BJP_08E140C01_Clostridiales_46_19
13_1_40cm_2_scaffold_717_4
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

2849..3526
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000372621B
amino acid ABC transporter membrane protein; K02029 polar amino acid transport system permease protein Tax=Caldatribacterium californiense
polar amino acid ABC transporter inner membrane subunit
13_1_40cm_2_scaffold_717_5
Pseudomonas sp. CF161, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3523..4170
DNA (648bp) protein (216aa)
Putative amino acid ABC transporter membrane protein n=1 Tax=Pseudomonas sp. CF161 RepID=S6IMI6_9PSED
Putative amino acid ABC transporter membrane protein {ECO:0000313|EMBL:EPL04372.1}; TaxID=911241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.
glutamine/glutamate ABC transporter permease
13_1_40cm_2_scaffold_717_6
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4468..5127)
DNA (660bp) protein (220aa)
cell envelope biogenesis protein TonB n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI00023757CC
Protein tonB2
TonB family protein {ECO:0000313|EMBL:EJE51786.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidov
13_1_40cm_2_scaffold_717_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5133..7190)
DNA (2058bp) protein (686aa)
Putative TonB-dependent receptor n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHT3_9BACT rbh
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
TonB-dependent receptor
13_1_40cm_2_scaffold_717_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7187..7573)
DNA (387bp) protein (129aa)
cell envelope biogenesis protein TonB n=1 Tax=Erwinia carotovora RepID=UPI0001A43899
TonB family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
energy transducer TonB
13_1_40cm_2_scaffold_717_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

7720..8937
DNA (1218bp) protein (406aa)
Putative membrane-bound dehydrogenase oxidoreductase protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WXA4_9RHIZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative membrane-bound dehydrogenase oxidoreductase protein
13_1_40cm_2_scaffold_717_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

9023..9637
DNA (615bp) protein (205aa)
Cytochrome c, class I n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46Q21_CUPPJ
class I cytochrome c Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
cytochrome c, class I
13_1_40cm_2_scaffold_717_11
R_NC10_66_22, NC10, Bacteria

Not on your lists

9634..10620
DNA (987bp) protein (329aa)
putative hydrolase transmembrane protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
putative hydrolase transmembrane protein id=14429957 bin=bin3_NC10 species=Herbaspirillum sp. JC206 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
putative hydrolase transmembrane protein
13_1_40cm_2_scaffold_717_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10617..11186
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036E0E27
putative phosphohistidine phosphatase SixA Tax=GWA2_Rokubacteria_73_35_curated
putative phosphohistidine phosphatase SixA
13_1_40cm_2_scaffold_717_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(11195..11464)
DNA (270bp) protein (90aa)
hypothetical protein
hypothetical protein id=14430725 bin=bin3_NC10 species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
13_1_40cm_2_scaffold_717_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(11465..11659)
DNA (195bp) protein (65aa)
hypothetical protein
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Uncharacterized protein id=14430726 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
13_1_40cm_2_scaffold_717_15
unknown

Not on your lists

comp(11709..11909)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_2_scaffold_717_16
unknown

Not on your lists

comp(11906..12037)
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_2_scaffold_717_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(12053..13342)
DNA (1290bp) protein (430aa)
hypothetical protein id=14626624 bin=bin7_NC10_sister species=Caminibacter mediatlanticus genus=Caminibacter taxon_order=Nautiliales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_2_scaffold_717_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13497..14552
DNA (1056bp) protein (352aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Patatin id=4226283 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
patatin family phospholipase
13_1_40cm_2_scaffold_717_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14559..15752)
DNA (1194bp) protein (398aa)
alpha-methylacyl-CoA racemase (EC:5.1.99.4) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
L-carnitine dehydratase/bile acid-inducible protein F id=4169030 bin=GWC2_Methylomirabilis_70_16 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
carnitine dehydratase
13_1_40cm_2_scaffold_717_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15792..17156)
DNA (1365bp) protein (455aa)
MmgE/PrpD family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
MmgE/PrpD family protein id=4756871 bin=GWC2_Methylomirabilis_70_16 species=Mesorhizobium loti genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
uncharacterized protein involved in propionate catabolism
13_1_40cm_2_scaffold_717_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17491..19518
DNA (2028bp) protein (676aa)
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14] Tax=GWA2_Rokubacteria_70_23_curated
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) id=4534565 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_717_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19515..21548
DNA (2034bp) protein (678aa)
5-oxoprolinase; K01474 N-methylhydantoinase B [EC:3.5.2.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FAQ3_VERMA
5-oxoprolinase
13_1_40cm_2_scaffold_717_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(21927..22682)
DNA (756bp) protein (252aa)
beta-lactamase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Beta-lactamase family protein id=5015982 bin=GWA2_Methylomirabilis_73_35 species=Thiomicrospira crunogena genus=Thiomicrospira taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
beta-lactamase
13_1_40cm_2_scaffold_717_24
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

23028..24212
DNA (1185bp) protein (395aa)
fadE; acyl-CoA dehydrogenase (EC:1.3.99.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acyl-CoA dehydrogenase id=5015980 bin=GWA2_Methylomirabilis_73_35 species=Streptomyces sp. e14 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_717_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

24333..25349
DNA (1017bp) protein (339aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 25 items

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