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13_1_40cm_2_scaffold_707

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_707_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..683)
DNA (681bp) protein (227aa)
rbsK; ribokinase (EC:2.7.1.15); K00852 ribokinase [EC:2.7.1.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribokinase id=4048097 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia multivorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ribokinase
13_1_40cm_2_scaffold_707_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(665..1564)
DNA (900bp) protein (300aa)
inosine-uridine preferring nucleoside hydrolase Tax=GWA2_Rokubacteria_73_35_curated
Inosine-uridine preferring nucleoside hydrolase id=3968020 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
inosine-uridine preferring nucleoside hydrolase
13_1_40cm_2_scaffold_707_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1685..1855
DNA (171bp) protein (57aa)
id=3968019 Tax=GWA2_Rokubacteria_70_23_curated
id=3968019 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_2_scaffold_707_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1845..3110)
DNA (1266bp) protein (422aa)
acetyl-CoA hydrolase (EC:2.8.3.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
acetyl-CoA hydrolase (EC:2.8.3.-) id=14627910 bin=bin7_NC10_sister species=Anaerostipes caccae genus=Anaerostipes taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
acetyl-CoA hydrolase (EC:2.8.3.-)
13_1_40cm_2_scaffold_707_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3331..4095
DNA (765bp) protein (255aa)
3-oxoacyl-[acyl-carrier-protein] reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative 3-oxoacyl-[acyl-carrier-protein] reductase id=4048086 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase/reductase SDR
13_1_40cm_2_scaffold_707_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

4108..4542
DNA (435bp) protein (145aa)
Endoribonuclease L-PSP id=4048084 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative endoribonuclease, translation initiation inhibitor (modular protein) Tax=GWA2_Rokubacteria_73_35_curated
putative endoribonuclease, translation initiation inhibitor (modular protein)
13_1_40cm_2_scaffold_707_7
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4682..4975
DNA (294bp) protein (98aa)
Amino acid adenylation domain-containing protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z5Y5_9BRAD
amino acid adenylation domain-containing protein
Amino acid adenylation domain-containing protein {ECO:0000313|EMBL:BAM88923.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;"
13_1_40cm_2_scaffold_707_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(5308..5571)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKT2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67731.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_2_scaffold_707_9
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6117..7847)
DNA (1731bp) protein (577aa)
hypothetical protein n=1 Tax=Methylococcus capsulatus RepID=UPI000362FBC2
exeA; general secretion pathway protein A
General secretion pathway protein A {ECO:0000313|EMBL:AAU90796.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Meth
13_1_40cm_2_scaffold_707_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8019..9026
DNA (1008bp) protein (336aa)
id=14628103 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14628103 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_707_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9035..11290)
DNA (2256bp) protein (752aa)
oxidoreductase (EC:1.-.-.-); K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Salicylyl-CoA 5-hydroxylase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4YEH4_SORCE rbh
salicylyl-CoA 5-hydroxylase
13_1_40cm_2_scaffold_707_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11440..12276)
DNA (837bp) protein (279aa)
ABC-type sugar transport systems, permease component Tax=GWA2_Rokubacteria_73_35_curated
ABC-type sugar transport system, permease component id=1703834 bin=GWA2_Methylomirabilis_73_35 species=Burkholderia sp. Ch1-1 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type sugar transport systems, permease component
13_1_40cm_2_scaffold_707_13

Not on your lists

comp(12273..13130)
DNA (858bp) protein (286aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL70358.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Binding-protein-dependent transport systems inner membrane component id=1703832 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type sugar transport systems, permease component
13_1_40cm_2_scaffold_707_14
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13242..13964)
DNA (723bp) protein (241aa)
extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RBG_16_Deltaproteobacteria_49_23_curated
Sugar ABC superfamily ATP binding cassette transporter, substrate-binding id=1703830 bin=GWA2_Methylomirabilis_73_35 species=Mobiluncus mulieris genus=Mobiluncus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_707_15
unknown

Not on your lists

14180..14404
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_2_scaffold_707_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

14706..14882
DNA (177bp) protein (59aa)
hypothetical protein id=14626282 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
13_1_40cm_2_scaffold_707_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(14858..16441)
DNA (1584bp) protein (528aa)
Geranylgeranyl reductase n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V217_TERSS rbh
geranylgeranyl reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
geranylgeranyl reductase
13_1_40cm_2_scaffold_707_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16478..19753
DNA (3276bp) protein (1092aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DEAD/H associated domain protein id=4895050 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DEAD/DEAH box helicase
Displaying 18 items

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