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13_1_40cm_2_scaffold_1946

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1946_1

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2..610
DNA (609bp) protein (203aa)
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y1Q4_9FIRM
Marine sediment metagenome DNA, contig: S03H2_C01894 {ECO:0000313|EMBL:GAH21887.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_2_scaffold_1946_2
Thermobaculum terrenum, Thermobaculum, Bacteria

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651..1226
DNA (576bp) protein (192aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_019
Phosphoribosylglycinamide formyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBZ8_THET1
phosphoribosylglycinamide formyltransferase
13_1_40cm_2_scaffold_1946_3
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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1198..2724
DNA (1527bp) protein (509aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
IMP cyclohydrolase n=1 Tax=Desulfurispora thermophila RepID=UPI00038116D1
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoana
13_1_40cm_2_scaffold_1946_4
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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2724..3470
DNA (747bp) protein (249aa)
tryptophan 2,3-dioxygenase (EC:1.13.11.11)
Tryptophan 2,3-dioxygenase {ECO:0000256|HAMAP-Rule:MF_01972}; Short=TDO {ECO:0000256|HAMAP-Rule:MF_01972};; EC=1.13.11.11 {ECO:0000256|HAMAP-Rule:MF_01972};; Tryptamin 2,3-dioxygenase {ECO:0000256|HAM
Tryptophan 2,3-dioxygenase n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PYJ1_STANL
13_1_40cm_2_scaffold_1946_5
unknown

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3506..3655
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_2_scaffold_1946_6
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3668..4609)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI0003797FB0
NADPH:quinone reductase {ECO:0000313|EMBL:KKD03148.1}; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
alcohol dehydrogenase GroES domain protein
13_1_40cm_2_scaffold_1946_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(4671..6155)
DNA (1485bp) protein (495aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZT8_CONWI rbh
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADB49914.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;"
13_1_40cm_2_scaffold_1946_8
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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6283..6729
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family n=1 Tax=Frankia sp. EUN1f RepID=D3D4H7_9ACTO
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFC82171.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
MarR family transcriptional regulator
13_1_40cm_2_scaffold_1946_9
Gordonia sp. KTR9, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6733..7872)
DNA (1140bp) protein (380aa)
Acetyl-CoA acetyltransferase n=1 Tax=Gordonia sp. KTR9 RepID=J9SRI7_9ACTO
Acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AFR50963.1}; TaxID=337191 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. KTR9.;"
13_1_40cm_2_scaffold_1946_10
unknown

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comp(7928..8230)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_2_scaffold_1946_11
unknown

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8533..8835
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_40cm_2_scaffold_1946_12
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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comp(9344..10069)
DNA (726bp) protein (242aa)
Sodium ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ62_9GAMM
ABC transporter related protein {ECO:0000313|EMBL:KKW01876.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
ABC transporter
13_1_40cm_2_scaffold_1946_13
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10077..10448)
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:BAN47744.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resin
13_1_40cm_2_scaffold_1946_14

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10544..11470
DNA (927bp) protein (309aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=542511 species="Bac
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=uncultured bacterium HF0500_16O16 RepID=E0XYF5_9BACT
13_1_40cm_2_scaffold_1946_15
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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11467..12015
DNA (549bp) protein (183aa)
uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2S9G6_9ACTO
Tax=BJP_08E140C01_Coriobacteriales_62_12
13_1_40cm_2_scaffold_1946_16
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

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12005..16333
DNA (4329bp) protein (1443aa)
carbamoyl-phosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RBG_16_Chloroflexi_51_9_curated
Carbamoyl-phosphate synthase large chain n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2A6_SPHTD
carbamoyl-phosphate synthase large subunit
13_1_40cm_2_scaffold_1946_17
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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16320..17078
DNA (759bp) protein (253aa)
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QMI6_DESB2
dihydroorotate dehydrogenase electron transfer subunit
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:ADK86229.1}; TaxID=644282 species="Bacteria; Proteobacteria; Deltaproteobacteria;
13_1_40cm_2_scaffold_1946_18
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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17075..17989
DNA (915bp) protein (305aa)
pyrD; oxidoreductase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=GWC2_Pelobacteraceae_58_13_curated
Dihydroorotate dehydrogenase id=4069925 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
dihydroorotate dehydrogenase 1B
13_1_40cm_2_scaffold_1946_19
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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17997..18683
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI00036DCF10
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein
13_1_40cm_2_scaffold_1946_20
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

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18718..19491
DNA (774bp) protein (258aa)
putative ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein Tax=RBG_13_Chloroflexi_50_21_curated
Putative ABC transporter ATP-binding protein id=1699794 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
ABC transporter-like protein
13_1_40cm_2_scaffold_1946_21
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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19463..20794
DNA (1332bp) protein (444aa)
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
atm:ANT_09930 hypothetical protein id=1244900 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
13_1_40cm_2_scaffold_1946_22
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(20795..21268)
DNA (474bp) protein (158aa)
phage tail protein n=1 Tax=Kaistia granuli RepID=UPI000366F9B8
Uncharacterized protein {ECO:0000313|EMBL:EPE96743.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sourc
conserved hypothetical phage tail region family protein
13_1_40cm_2_scaffold_1946_23
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(21249..22508)
DNA (1260bp) protein (420aa)
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RJS4_MOOTA
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67931.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
hypothetical protein
13_1_40cm_2_scaffold_1946_24
unknown

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22753..23226
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_40cm_2_scaffold_1946_25
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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23227..23748
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XKT2_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33164.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_2_scaffold_1946_26
unknown

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comp(23848..24306)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_2_scaffold_1946_27

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24362..24931
DNA (570bp) protein (190aa)
Putative Short chain dehydrogenase n=1 Tax=mine drainage metagenome RepID=E6PN77_9ZZZZ
Putative Short chain dehydrogenase {ECO:0000313|EMBL:CBH96379.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative oxidoreductase
13_1_40cm_2_scaffold_1946_28
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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24916..25065
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EXZ7_9BACT
Short-chain alcohol dehydrogenase of unknown specificity
Uncharacterized protein {ECO:0000313|EMBL:CCW35188.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas cal
Displaying 28 items

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