ggKbase home page

13_1_40cm_2_scaffold_415

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_415_1
unknown

Not on your lists

3..140
DNA (138bp) protein (46aa)

This feature has no annotations

13_1_40cm_2_scaffold_415_2
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

145..441
DNA (297bp) protein (99aa)
Transcriptional regulator AsnC family n=1 Tax=Patulibacter medicamentivorans RepID=H0EAQ7_9ACTN
Transcriptional regulator AsnC family {ECO:0000313|EMBL:EHN09232.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="P
AsnC family transcriptional regulator
13_1_40cm_2_scaffold_415_3

Not on your lists

comp(438..1142)
DNA (705bp) protein (235aa)
Phosphotransferase domain-containing protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0Z8F0_9ZZZZ
Phosphotransferase domain-containing protein {ECO:0000313|EMBL:EQD44281.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage
phosphotransferase domain-containing protein
13_1_40cm_2_scaffold_415_4
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(1145..2032)
DNA (888bp) protein (296aa)
ftsY; signal recognition particle-docking protein FtsY id=24448821 bin=RBG_19FT_COMBO_GAL15_69_19 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ftsY; signal recognition particle-docking protein FtsY Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
ftsY; cell division protein FtsY
13_1_40cm_2_scaffold_415_5
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2042..5203)
DNA (3162bp) protein (1054aa)
Chromosome partition protein Smc n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PYU0_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;"
chromosome segregation protein SMC
13_1_40cm_2_scaffold_415_6
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(5261..5938)
DNA (678bp) protein (226aa)
ribonuclease III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=CG_Elusi_04
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=RNC_ROSCS
13_1_40cm_2_scaffold_415_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6196..6444)
DNA (249bp) protein (83aa)
Acyl carrier protein id=2638132 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acpP; acyl carrier protein; K02078 acyl carrier protein Tax=GWA2_Rokubacteria_70_23_curated
acpP; acyl carrier protein
13_1_40cm_2_scaffold_415_8
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6566..7294)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026268EE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ24077.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
13_1_40cm_2_scaffold_415_9
Sporolactobacillus laevolacticus, Sporolactobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7486..8403)
DNA (918bp) protein (306aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1395513 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolact
malonyl CoA-ACP transacylase n=1 Tax=Sporolactobacillus inulinus RepID=UPI000255C66B
malonyl CoA-acyl carrier protein transacylase
13_1_40cm_2_scaffold_415_10
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8705..9109)
DNA (405bp) protein (135aa)
ATPase subunit H n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW91_RUBXD
hypothetical protein Tax=RBG_16_Actinobacteria_64_13_curated
ATPase subunit H
13_1_40cm_2_scaffold_415_11
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9184..9669)
DNA (486bp) protein (162aa)
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
Phosphopantetheine adenylyltransferase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NE95_DESAR
13_1_40cm_2_scaffold_415_12

Not on your lists

comp(9666..10235)
DNA (570bp) protein (190aa)
Methyltransferase small domain superfamily protein n=1 Tax=uncultured prokaryote RepID=H5SLX0_9ZZZZ
Methyltransferase small domain superfamily protein {ECO:0000313|EMBL:BAL57156.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
methyltransferase
13_1_40cm_2_scaffold_415_13
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(10205..11575)
DNA (1371bp) protein (457aa)
amidase (EC:3.5.1.4)
amidase n=1 Tax=cyanobacterium PCC 7702 RepID=UPI00035FFA54 rbh
Amidase {ECO:0000313|EMBL:KIY09412.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
13_1_40cm_2_scaffold_415_14
RLO_PLX_64_10, Bacteria

Not on your lists

comp(11550..12479)
DNA (930bp) protein (310aa)
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
selenide, water dikinase; K01008 selenide, water dikinase [EC:2.7.9.3] id=14632058 bin=bin9_gal15 species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
Selenide, water dikinase
13_1_40cm_2_scaffold_415_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12594..13550
DNA (957bp) protein (319aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6V3_SPHTD
extradiol ring-cleavage dioxygenase class III protein subunit B Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
extradiol ring-cleavage dioxygenase class III protein subunit B
13_1_40cm_2_scaffold_415_16
GWC2_ACD39_50_8_curated, ACD39, Bacteria

Not on your lists

comp(13489..14796)
DNA (1308bp) protein (436aa)
Peptidase M20 id=4735956 bin=GWC2_ACD39_50_8 species=Bacillus cellulosilyticus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39 rbh
peptidase M20 Tax=GWC2_ACD39_50_8_curated
peptidase m20
13_1_40cm_2_scaffold_415_17
CG_Magasa_02, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14807..16858)
DNA (2052bp) protein (684aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=CG_Magasa_02
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2A2_THERP
13_1_40cm_2_scaffold_415_18
unknown

Not on your lists

17014..17862
DNA (849bp) protein (283aa)

This feature has no annotations

13_1_40cm_2_scaffold_415_19
unknown

Not on your lists

17956..18846
DNA (891bp) protein (297aa)

This feature has no annotations

13_1_40cm_2_scaffold_415_20
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18843..19616
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME77_RHOM4
Uncharacterized protein {ECO:0000313|EMBL:AKF09821.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
hypothetical protein
13_1_40cm_2_scaffold_415_21
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(19620..20453)
DNA (834bp) protein (278aa)
DegV family protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AU95_HERA2
degV family protein Tax=RBG_16_Chloroflexi_57_9_curated
degV family protein
13_1_40cm_2_scaffold_415_22
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(20463..22091)
DNA (1629bp) protein (543aa)
DAK2 domain fusion protein YloV n=4 Tax=Dehalococcoides mccartyi RepID=D3SJK4_DEHSG rbh
DAK2 domain fusion protein YloV; K07030 Tax=RBG_13_Chloroflexi_50_10_curated
DAK2 domain-containing protein
13_1_40cm_2_scaffold_415_23
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(22095..22628)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1YAJ0_ANEAE
hypothetical protein Tax=RBG_16_Chloroflexi_56_8_curated
hypothetical protein
13_1_40cm_2_scaffold_415_24
unknown

Not on your lists

comp(22625..22852)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_2_scaffold_415_25
unknown

Not on your lists

22865..23074
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_2_scaffold_415_26
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(23090..24199)
DNA (1110bp) protein (370aa)
Histone deacetylase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WUH0_KYRT2
Histone deacetylase; K04768 acetoin utilization protein AcuC Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
histone deacetylase
13_1_40cm_2_scaffold_415_27
S_OP1_64_32, KB1, Bacteria

Not on your lists

24222..25064
DNA (843bp) protein (281aa)
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formiminotransferase n=1 Tax=mine drainage metagenome RepID=T1C061_9ZZZZ
Glutamate formiminotransferase Tax=S_OP1_64_32
Displaying 27 items

View Taxonomy