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13_1_40cm_2_scaffold_823

Search features with annotation key words

Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_823_1
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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2..1210
DNA (1209bp) protein (403aa)
L-rhamnose isomerase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TSC9_9CHLR rbh
L-rhamnose isomerase {ECO:0000313|EMBL:EFH83330.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemife
L-rhamnose isomerase
13_1_40cm_2_scaffold_823_2
RLO_PLX_64_10, Bacteria

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1212..2666
DNA (1455bp) protein (485aa)
Pentulose/hexulose kinase n=2 Tax=Singulisphaera acidiphila RepID=L0D7S6_SINAD rbh
carbohydrate kinase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
pentulose/hexulose kinase
13_1_40cm_2_scaffold_823_3
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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2663..3313
DNA (651bp) protein (217aa)
fucA; L-fuculose phosphate aldolase (EC:4.1.2.17)
L-fuculose phosphate aldolase FucA {ECO:0000313|EMBL:AFV11243.1}; EC=4.1.2.17 {ECO:0000313|EMBL:AFV11243.1};; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoana
L-fuculose phosphate aldolase FucA n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LEG0_THEPS
13_1_40cm_2_scaffold_823_4
Enterococcus gilvus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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3313..4104
DNA (792bp) protein (264aa)
3-oxoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
short-chain dehydrogenase n=1 Tax=Frankia sp. BMG5.12 RepID=UPI0003790C99
Uncharacterized protein {ECO:0000313|EMBL:EOI53876.1}; TaxID=1158614 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gilvus ATCC BAA-350.
13_1_40cm_2_scaffold_823_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(4295..5080)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00036012A5 rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EFH86849.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonoba
short-chain dehydrogenase/reductase SDR
13_1_40cm_2_scaffold_823_6
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5261..6268
DNA (1008bp) protein (336aa)
RNA polymerase sigma70 factor n=1 Tax=Rhizobium loti RepID=UPI00035E67E1 rbh
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:AID31608.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_2_scaffold_823_7
unknown

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comp(6413..6652)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_2_scaffold_823_8
R_RIF_OP11_02_39_21, RIF-OP11-2, Microgenomates, Bacteria

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comp(6905..7492)
DNA (588bp) protein (196aa)
transmembrane_regions 107..129 id=1246952 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
transmembrane_regions 107..129 Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_02_39_21_curated
13_1_40cm_2_scaffold_823_9
GWB1_OP11_43_11, Gottesmanbacteria, Microgenomates, Bacteria

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comp(7489..10032)
DNA (2544bp) protein (848aa)
PE-PGRS FAMILY protein n=23 Tax=Mycobacterium tuberculosis RepID=L0NYE3_MYCTU id=5087020 bin=GWF1_OP11_31_35_complete species=Mycobacterium tuberculosis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1) rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKS84882.1}; TaxID=1618446 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWB1_43_11.;"
glycosyl transferase, family 2
13_1_40cm_2_scaffold_823_10
unknown

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comp(10073..10279)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_2_scaffold_823_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

10945..11430
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U3K4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH82994.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
hypothetical protein
13_1_40cm_2_scaffold_823_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11642..11989
DNA (348bp) protein (116aa)
YCII-related protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V3P3_VARPE
ycii-like protein
YCII-related protein {ECO:0000313|EMBL:ADU35823.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (str
13_1_40cm_2_scaffold_823_13
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11986..13254
DNA (1269bp) protein (423aa)
RNA polymerase subunit sigma-24 n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHY5_SORCE
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EPX63370.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cys
RNA polymerase subunit sigma-24
Displaying 13 items

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