ggKbase home page

13_1_40cm_2_scaffold_10938

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_10938_1
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(3..584)
DNA (582bp) protein (194aa)
RNA methyltransferase, RsmE family; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RBG_16_Spirochaetes_49_21_curated
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QSF9_CHLT3
16S ribosomal RNA methyltransferase RsmE
13_1_40cm_2_scaffold_10938_2
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(574..1434)
DNA (861bp) protein (287aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EP54_CLOPA
13_1_40cm_2_scaffold_10938_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(1447..2550)
DNA (1104bp) protein (368aa)
Chaperone protein DnaJ n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F925_ACIC5
molecular chaperone DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
dnaJ; chaperone protein DnaJ
13_1_40cm_2_scaffold_10938_4
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(2584..3165)
DNA (582bp) protein (194aa)
Protein GrpE n=1 Tax=Caldalkalibacillus thermarum TA2.A1 RepID=F5L8S1_9BACI
protein grpE; K03687 molecular chaperone GrpE Tax=RBG_13_OP8X_37_8_curated
heat shock protein GrpE
13_1_40cm_2_scaffold_10938_5
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(3269..4321)
DNA (1053bp) protein (351aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ59_CHLTF
heat shock gene repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobact
13_1_40cm_2_scaffold_10938_6
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(4339..5097)
DNA (759bp) protein (253aa)
biotin/lipoate-protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
Octanoyltransferase LipM id=3253213 bin=GWC2_Nitrospirae_57_13 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
13_1_40cm_2_scaffold_10938_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5209..6825)
DNA (1617bp) protein (539aa)
Peptidase S1C, Do n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRR3_KORVE
peptidase S1C, Do
Peptidase S1C, Do {ECO:0000313|EMBL:ABF40437.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter vers
13_1_40cm_2_scaffold_10938_8
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(7045..8232)
DNA (1188bp) protein (396aa)
aminotransferase class I/II n=1 Tax=cyanobacterium PCC 7702 RepID=UPI000366167B
Aminotransferase {ECO:0000313|EMBL:KIJ78257.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
class I/II aminotransferase
13_1_40cm_2_scaffold_10938_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(8225..9271)
DNA (1047bp) protein (349aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIK1_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM65820.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_40cm_2_scaffold_10938_10
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(9908..10204)
DNA (297bp) protein (99aa)
Putative glycosyl transferase n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3MHS6_RHISN
glycosyltransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
glycosyl transferase
Displaying 10 items

View Taxonomy