ggKbase home page

13_1_40cm_2_scaffold_14962

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_14962_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

2..1777
DNA (1776bp) protein (592aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Cation/multidrug efflux pump id=4778999 bin=GWA2_OP3_52_12 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
cation/multidrug efflux pump
13_1_40cm_2_scaffold_14962_2
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

1818..3005
DNA (1188bp) protein (396aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Acriflavin resistance protein id=4950351 bin=GWC2_Proteo_65_14_Ab886 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Cation/multidrug efflux pump
13_1_40cm_2_scaffold_14962_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3059..4279)
DNA (1221bp) protein (407aa)
FAD-binding monooxygenase; K05712 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI000377DAC2 rbh
FAD-binding monooxygenase
13_1_40cm_2_scaffold_14962_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4281..5396)
DNA (1116bp) protein (372aa)
Amidohydrolase n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7N2_HYPSM rbh
amidohydrolase Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
amidohydrolase
13_1_40cm_2_scaffold_14962_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

6165..6947
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1F1_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
13_1_40cm_2_scaffold_14962_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7054..8235)
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INP6_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_2_scaffold_14962_7
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8393..10459
DNA (2067bp) protein (689aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QPL4_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB40673.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
13_1_40cm_2_scaffold_14962_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(10521..11522)
DNA (1002bp) protein (334aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
13_1_40cm_2_scaffold_14962_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(11541..12590)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z3T9_9GAMM
thiol-disulfide isomerase or thioredoxin Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
peroxiredoxin
13_1_40cm_2_scaffold_14962_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12606..12890)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363F973
thiol-disulfide isomerase or thioredoxin Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
thiol-disulfide isomerase or thioredoxin
13_1_40cm_2_scaffold_14962_11
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(13001..13303)
DNA (303bp) protein (101aa)
rbp; RNA-binding protein Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
Putative RNA-binding protein id=3079802 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
RNA-binding protein
13_1_40cm_2_scaffold_14962_12
unknown

Not on your lists

13415..13675
DNA (261bp) protein (87aa)

This feature has no annotations

Displaying 12 items

View Taxonomy