ggKbase home page

13_1_40cm_2_scaffold_1607

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1607_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1..195
DNA (195bp) protein (65aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_2_scaffold_1607_2
bacterium UASB14, Bacteria

Not on your lists

comp(217..1278)
DNA (1062bp) protein (354aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK51268.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
hypothetical protein SPAM2_06712 id=3762653 bin=GWA2_Elusimicrobia_69_24 species=Frankia symbiont of Datisca glomerata genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein
13_1_40cm_2_scaffold_1607_3
unknown

Not on your lists

comp(1241..1591)
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_40cm_2_scaffold_1607_4
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1600..2124)
DNA (525bp) protein (175aa)
Cytochrome c biogenesis protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z6L9_9SPHN
Cytochrome c biogenesis protein {ECO:0000313|EMBL:EGD59679.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
hypothetical protein
13_1_40cm_2_scaffold_1607_5
RBG_16_Betaproteobacteria_56_24_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2251..2514
DNA (264bp) protein (88aa)
N-6 DNA methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72] Tax=RBG_16_Betaproteobacteria_56_24_curated
Putative uncharacterized protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JKW9_SYNJB
hypothetical protein
13_1_40cm_2_scaffold_1607_6
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

2657..3751
DNA (1095bp) protein (365aa)
DNA protecting protein DprA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILA8_KORVE
DNA protecting protein DprA; K04096 DNA processing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
DNA processing protein DprA
13_1_40cm_2_scaffold_1607_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3829..6261
DNA (2433bp) protein (811aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000256|RuleBase:RU000518};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=45419
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003763D11
DNA topoisomerase
13_1_40cm_2_scaffold_1607_8
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

6301..7455
DNA (1155bp) protein (385aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17); K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=GWC2_Nitrospirae_57_9_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037D7EAD
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
13_1_40cm_2_scaffold_1607_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7598..8356
DNA (759bp) protein (253aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobact
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVH5_KORVE
1-acyl-sn-glycerol-3-phosphate acyltransferase
13_1_40cm_2_scaffold_1607_10
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

8307..9026
DNA (720bp) protein (240aa)
Putative glutamine amidotransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHW5_CHLTF
putative glutamine amidotransferase
Putative glutamine amidotransferase {ECO:0000313|EMBL:AEP11025.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermo
13_1_40cm_2_scaffold_1607_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

9075..9527
DNA (453bp) protein (151aa)
Glutaredoxin-like domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C580_SPHTD
glutaredoxin-like domain-containing protein
Glutaredoxin-like domain protein {ECO:0000313|EMBL:ACZ39397.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter
13_1_40cm_2_scaffold_1607_12
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9564..9749
DNA (186bp) protein (62aa)
Glutaredoxin-like domain protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UIJ6_ANASK
glutaredoxin-like domain-containing protein
Glutaredoxin-like domain protein {ECO:0000313|EMBL:ACL66234.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxoba
13_1_40cm_2_scaffold_1607_13
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9761..10816
DNA (1056bp) protein (352aa)
UPI0003CE8B47 related cluster n=1 Tax=unknown RepID=UPI0003CE8B47
Uncharacterized protein {ECO:0000313|EMBL:KHD07091.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
putative aminopeptidase
13_1_40cm_2_scaffold_1607_14
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

10940..11698
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y930_SORCE
Cyclase Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
hypothetical protein
13_1_40cm_2_scaffold_1607_15
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

11852..12544
DNA (693bp) protein (231aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_40cm_2_scaffold_1607_16
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12550..13086
DNA (537bp) protein (179aa)
HslV; ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] Tax=CG_Desulfob_01
ATP-dependent protease subunit HslV n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=HSLV_SOLUE
ATP-dependent protease peptidase subunit
13_1_40cm_2_scaffold_1607_17
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

13099..14490
DNA (1392bp) protein (464aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q20_SOLUE rbh
hslU; ATP-dependent protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hslU; ATP-dependent protease ATP-binding subunit HslU
13_1_40cm_2_scaffold_1607_18
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

14531..15508
DNA (978bp) protein (326aa)
fibronectin, type III Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Putative Fibronectin, type III id=4958132 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
fibronectin type III domain-containing protein
13_1_40cm_2_scaffold_1607_19
R_WOR_2_67_20, WOR-2, Bacteria

Not on your lists

15751..16401
DNA (651bp) protein (217aa)
talC; translaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] Tax=RIFCSPHIGHO2_02_FULL_WOR_2_67_20_curated
talC; translaldolase (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Aquifex aeolicus (strain VF5) RepID=TAL_AQUAE
13_1_40cm_2_scaffold_1607_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

16434..17993
DNA (1560bp) protein (520aa)
Propionyl-CoA carboxylase carboxyltransferase subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHF3_KORVE
carboxyl transferase
Propionyl-CoA carboxylase carboxyltransferase subunit {ECO:0000313|EMBL:ABF43697.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source
13_1_40cm_2_scaffold_1607_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

18261..19523
DNA (1263bp) protein (421aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Rhodopseudomonas palustris RepID=B3QAJ6_RHOPT
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:CDM64146.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatog
HlyD family heavy metal efflux protein
13_1_40cm_2_scaffold_1607_22
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19520..22630
DNA (3111bp) protein (1037aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAB1_ACIDE
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:EER58584.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;
CzcA family heavy metal efflux pump
13_1_40cm_2_scaffold_1607_23
unknown

Not on your lists

22749..22808
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 23 items

View Taxonomy