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13_1_40cm_2_scaffold_2529

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2529_1
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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2..247
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JXN6_9BACT
Uncharacterized protein (Fragment) Tax=GWB2_Bacteroidetes_41_8_curated
hypothetical protein
13_1_40cm_2_scaffold_2529_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(625..1986)
DNA (1362bp) protein (454aa)
Patched family protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QMN1_9EURY
Patched family protein {ECO:0000313|EMBL:EFW94215.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilu
divIVA; Cell division initiation protein
13_1_40cm_2_scaffold_2529_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1983..2363)
DNA (381bp) protein (127aa)
Peptidase M48, Ste24p n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILN4_KORVE
peptidase M48, Ste24p
Peptidase M48, Ste24p {ECO:0000313|EMBL:ABF42216.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter
13_1_40cm_2_scaffold_2529_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2584..3012
DNA (429bp) protein (143aa)
Response regulator receiver protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DS07_9PROT
Response regulator receiver protein {ECO:0000313|EMBL:CCU62175.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nit
diguanylate cyclase
13_1_40cm_2_scaffold_2529_5
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3040..4206)
DNA (1167bp) protein (389aa)
gcdH; glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Glutaryl-CoA dehydrogenase id=5014972 bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
gcdH; glutaryl-CoA dehydrogenase
13_1_40cm_2_scaffold_2529_6
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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4339..5451
DNA (1113bp) protein (371aa)
metal dependent phosphohydrolase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Metal dependent phosphohydrolase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUE8_KORVE
metal dependent phosphohydrolase
13_1_40cm_2_scaffold_2529_7
unknown

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comp(5517..5702)
DNA (186bp) protein (62aa)

This feature has no annotations

13_1_40cm_2_scaffold_2529_8
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5746..7032)
DNA (1287bp) protein (429aa)
Amidohydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01V73_SOLUE
Amidohydrolase {ECO:0000313|EMBL:KFA91597.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter
amidohydrolase
13_1_40cm_2_scaffold_2529_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(7016..8341)
DNA (1326bp) protein (442aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021K3_SOLUE
Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Fis family transcriptional regulator
13_1_40cm_2_scaffold_2529_10
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(8290..10389)
DNA (2100bp) protein (700aa)
Multi-sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRV5_KORVE
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
multi-sensor signal transduction histidine kinase
13_1_40cm_2_scaffold_2529_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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10490..11695
DNA (1206bp) protein (402aa)
Type II secretion system protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRV8_KORVE
type II secretion system protein; K02653 type IV pilus assembly protein PilC Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
type II secretion system protein
13_1_40cm_2_scaffold_2529_12
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

11700..13268
DNA (1569bp) protein (523aa)
signal transduction histidine kinase, nitrogen specific, NtrB; K02668 two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRV9_KORVE
signal transduction histidine kinase, nitrogen specific, NtrB
13_1_40cm_2_scaffold_2529_13
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

13269..14669
DNA (1401bp) protein (467aa)
Response regulator HsfA n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJT0_9BACT
two component, sigma54 specific, Fis family transcriptional regulator; K02667 two-component system, NtrC family, response regulator PilR Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
two component, sigma54 specific, Fis family transcriptional regulator
13_1_40cm_2_scaffold_2529_14
bacterium UASB14, Bacteria

Not on your lists

comp(14706..16016)
DNA (1311bp) protein (437aa)
putative amine oxidase (EC:1.-.-.-)
Putative Amine oxidase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PIL8_9BACT
Putative Amine oxidase {ECO:0000313|EMBL:GAK52112.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
13_1_40cm_2_scaffold_2529_15
unknown

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comp(16013..16117)
DNA (105bp) protein (35aa)

This feature has no annotations

Displaying 15 items

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