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13_1_40cm_2_scaffold_5116

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_5116_1
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(3..776)
DNA (774bp) protein (258aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUY0_KORVE
outer membrane receptor protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Cna B domain-containing protein
13_1_40cm_2_scaffold_5116_2
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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comp(789..2378)
DNA (1590bp) protein (530aa)
serA; d-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
D-3-phosphoglycerate dehydrogenase id=1900606 bin=GWD2_Nitrospirae-related_57_8 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
SerA; D-3-phosphoglycerate dehydrogenase
13_1_40cm_2_scaffold_5116_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2383..3567)
DNA (1185bp) protein (395aa)
aminotransferase (EC:2.6.1.-)
Aminotransferase {ECO:0000313|EMBL:ABJ81380.1}; EC=2.6.1.- {ECO:0000313|EMBL:ABJ81380.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Soli
Aminotransferase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02C36_SOLUE
13_1_40cm_2_scaffold_5116_4
unknown

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comp(3697..3981)
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_2_scaffold_5116_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

4115..5425
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003800869
peptidase M48, Ste24p Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
peptidase M48, Ste24p
13_1_40cm_2_scaffold_5116_6
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

5564..6469
DNA (906bp) protein (302aa)
Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C1Z1_DESTA
acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Glutaconate CoA-transferase subunit A
13_1_40cm_2_scaffold_5116_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6562..7716
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-A16 RepID=UPI0003612CC3
putative dioxygenase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_2_scaffold_5116_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7784..9148)
DNA (1365bp) protein (455aa)
major facilitator superfamily protein; K08195 MFS transporter, AAHS family, 4-hydroxybenzoate transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
major facilitator superfamily permease; K08195 MFS transporter, AAHS family, 4-hydroxybenzoate transporter id=12554345 bin=CNBR_ACIDO species=Herbaspirillum sp. GW103 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
major facilitator superfamily protein
13_1_40cm_2_scaffold_5116_9
RIFCSPLOWO2_12_FULL_Gammaproteobacteria_52_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9308..11230)
DNA (1923bp) protein (641aa)
Ankyrin-related protein n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIP0_9BACT
similar to ankyrin 2,3/unc44; K15503 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_52_10_curated
hypothetical protein
13_1_40cm_2_scaffold_5116_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

11528..12013
DNA (486bp) protein (162aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
13_1_40cm_2_scaffold_5116_11
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12229..12777
DNA (549bp) protein (183aa)
TonB-dependent receptor plug n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NWT1_GRAMM
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEU34369.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain A
13_1_40cm_2_scaffold_5116_12
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12851..13183
DNA (333bp) protein (111aa)
TonB-denpendent receptor n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B59449
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADV81330.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA
Displaying 12 items

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