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13_1_40cm_2_scaffold_594

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_594_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(3..1148)
DNA (1146bp) protein (382aa)
ATPase componens of ABC transporters with duplicated ATPase domains n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFY6_CHLTF
ATPase component of ABC transporters with duplicated ATPase domain {ECO:0000313|EMBL:CDM65004.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyr
ABC transporter ATPase
13_1_40cm_2_scaffold_594_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(1277..2527)
DNA (1251bp) protein (417aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:ABF43232.1}; EC=3.4.21.102 {ECO:0000313|EMBL:ABF43232.1};; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteri
Carboxyl-terminal protease n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIR8_KORVE
carboxyl-terminal protease
13_1_40cm_2_scaffold_594_3
Megasphaera sp. BV3C16-1, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2631..3044
DNA (414bp) protein (138aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1111454 speci
RNAse H domain protein, YqgF family n=1 Tax=Megasphaera sp. BV3C16-1 RepID=U7UEK7_9FIRM
Holliday junction resolvase YqgF
13_1_40cm_2_scaffold_594_4
unknown

Not on your lists

comp(3224..3547)
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_2_scaffold_594_5
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

Not on your lists

comp(4110..4670)
DNA (561bp) protein (187aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RBG_13_Nitrospirae_41_22_curated
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQ55_ROSCS
13_1_40cm_2_scaffold_594_6
Staphylococcus hyicus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4697..5197
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003631726
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
FolK protein {ECO:0000313|EMBL:AJC96942.1}; TaxID=1284 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus hyicus.;"
13_1_40cm_2_scaffold_594_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5180..5545)
DNA (366bp) protein (122aa)
Arginine repressor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=ARGR_KORVE
ArgR family transcriptional regulator
Arginine repressor {ECO:0000255|HAMAP-Rule:MF_00173}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain
13_1_40cm_2_scaffold_594_8
GWF2_WOR_2_43_52_curated, WOR-2, Bacteria

Not on your lists

5723..6652
DNA (930bp) protein (310aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3) Tax=GWF2_WOR_2_43_52_curated
Ornithine carbamoyltransferase id=4012376 bin=GWF2_OP3_43_52 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ornithine carbamoyltransferase
13_1_40cm_2_scaffold_594_9
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

6649..7878
DNA (1230bp) protein (410aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=RBG_16_Caldithrix_48_16_curated
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=ASSY_ROSS1
13_1_40cm_2_scaffold_594_10
Thermoanaerobacter mathranii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

7853..9163
DNA (1311bp) protein (437aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
Argininosuccinate lyase n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7ASW1_THEM3
argininosuccinate lyase
13_1_40cm_2_scaffold_594_11
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9164..10429
DNA (1266bp) protein (422aa)
Major facilitator superfamily MFS_1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J9R1_ANAD2
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACL67449.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyx
13_1_40cm_2_scaffold_594_12
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(10422..10877)
DNA (456bp) protein (152aa)
N-acetylglutamate synthase (EC:2.3.1.1); K00619 amino-acid N-acetyltransferase [EC:2.3.1.1] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000370541B
N-acetyltransferase GCN5
13_1_40cm_2_scaffold_594_13
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10874..11563)
DNA (690bp) protein (230aa)
N-acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotra
Acetylglutamate kinase n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZFJ5_TERRK
13_1_40cm_2_scaffold_594_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(11560..12540)
DNA (981bp) protein (327aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B44_SOLUE
13_1_40cm_2_scaffold_594_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12581..14119)
DNA (1539bp) protein (513aa)
Alpha/beta hydrolase fold protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZ91_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61169.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedospha
13_1_40cm_2_scaffold_594_16
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14142..14630
DNA (489bp) protein (163aa)
rfaE bifunctional protein; K03272 D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
RfaE bifunctional protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NI68_DESAR
glycerol-3-phosphate cytidylyltransferase
13_1_40cm_2_scaffold_594_17
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

14602..18084
DNA (3483bp) protein (1161aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Transcription-repair-coupling factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHV1_KORVE
transcription-repair coupling factor
13_1_40cm_2_scaffold_594_18
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

18108..19154
DNA (1047bp) protein (349aa)
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X3J0_ACISM
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_40cm_2_scaffold_594_19

Not on your lists

19517..19858
DNA (342bp) protein (114aa)
Transcriptional repressor, CopY family n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L8H1_FRASN
MarR family transcriptional regulatory protein {ECO:0000313|EMBL:AGT45809.1}; TaxID=1381397 species="Bacteria; environmental samples.;" source="uncultured marine bacterium PPT_M2.;"
CopY family transcriptional regulator
13_1_40cm_2_scaffold_594_20
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19945..20838
DNA (894bp) protein (298aa)
Glyoxalase family protein n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MLJ6_PSEPS
Glyoxalase family protein {ECO:0000313|EMBL:ELS26868.1}; TaxID=1149133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/ps
Glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_2_scaffold_594_21
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(20892..21758)
DNA (867bp) protein (289aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
13_1_40cm_2_scaffold_594_22
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(21759..23030)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PEI1_9ZZZZ
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
13_1_40cm_2_scaffold_594_23
Vibrio proteolyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23393..24484
DNA (1092bp) protein (364aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyr
Glucose-1-phosphate adenylyltransferase n=1 Tax=Vibrio proteolyticus NBRC 13287 RepID=U3BBX5_VIBPR
glucose-1-phosphate adenylyltransferase
13_1_40cm_2_scaffold_594_24
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(24511..25263)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025A1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83425.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
13_1_40cm_2_scaffold_594_25
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25596..26906
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y1A2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EMS40977.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteri
alpha/beta hydrolase fold protein
13_1_40cm_2_scaffold_594_26
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27015..28499
DNA (1485bp) protein (495aa)
MmgE/PrpD family protein n=1 Tax=Xanthobacteraceae RepID=UPI0003754AC3 rbh
MmgE/PrpD family protein
MmgE/PrpD family protein {ECO:0000313|EMBL:ADH88913.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strai
13_1_40cm_2_scaffold_594_27
unknown

Not on your lists

28609..28917
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_2_scaffold_594_28
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(29053..30504)
DNA (1452bp) protein (484aa)
Beta-lactamase domain-containing protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BTR8_9GAMM
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
beta-lactamase domain-containing protein
Displaying 28 items

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