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13_1_40cm_2_scaffold_679

Search features with annotation key words

Displaying items 1-30 of 47 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_679_1
unknown

Not on your lists

1..267
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_40cm_2_scaffold_679_2
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(343..534)
DNA (192bp) protein (64aa)
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
13_1_40cm_2_scaffold_679_3
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

704..1324
DNA (621bp) protein (207aa)
transcriptional regulator, TetR family Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
TetR family transcriptional regulator id=12556847 bin=CNBR_ACIDO species=Aminobacterium colombiense genus=Aminobacterium taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcriptional regulator, TetR family
13_1_40cm_2_scaffold_679_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1321..2715
DNA (1395bp) protein (465aa)
Outer membrane efflux protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM03_KORVE
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:ABF42097.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Kor
13_1_40cm_2_scaffold_679_5
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

2715..3926
DNA (1212bp) protein (404aa)
secretion protein HlyD family protein; K03543 multidrug resistance protein A Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
secretion protein HlyD family protein; K03543 multidrug resistance protein A id=12556845 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
secretion protein HlyD family protein
13_1_40cm_2_scaffold_679_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

4014..5576
DNA (1563bp) protein (521aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CU8_SOLUE
EmrB/QacA family drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ABJ81118.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" s
13_1_40cm_2_scaffold_679_7
unknown

Not on your lists

5621..6052
DNA (432bp) protein (144aa)

This feature has no annotations

13_1_40cm_2_scaffold_679_8
Methanobacterium sp. MB1, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6119..7099)
DNA (981bp) protein (327aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:CDG64413.1}; EC=5.1.3.2 {ECO:0000313|EMBL:CDG64413.1};; TaxID=1379702 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriacea
UDP-glucose 4-epimerase n=1 Tax=Methanobacterium sp. MB1 RepID=U6EBP5_9EURY
13_1_40cm_2_scaffold_679_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7096..8040)
DNA (945bp) protein (315aa)
putative dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative dTDP-glucose 4,6-dehydratase (EC:4.2.1.46); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=14632931 bin=bin9_gal15 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin9_gal15 organism_group=GAL15
NAD-dependent epimerase/dehydratase
13_1_40cm_2_scaffold_679_10
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8117..8635)
DNA (519bp) protein (173aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H505_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB93522.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;
13_1_40cm_2_scaffold_679_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(8628..9224)
DNA (597bp) protein (199aa)
ugd; UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Brachyspira sp. CAG:484 RepID=R5HKK2_9SPIR
udg; UDP-glucose 6-dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
13_1_40cm_2_scaffold_679_12
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(9227..9526)
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG41_CHLTF
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_40cm_2_scaffold_679_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9600..10262)
DNA (663bp) protein (221aa)
Butyryl-CoA:acetate CoA transferase {ECO:0000313|EMBL:ABF40167.1}; EC=2.8.3.8 {ECO:0000313|EMBL:ABF40167.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candid
3-oxoadipate CoA-succinyl transferase, beta subunit n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3E0_ACIC5
butyryl-CoA:acetate CoA transferase
13_1_40cm_2_scaffold_679_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(10259..10963)
DNA (705bp) protein (235aa)
3-oxoacid CoA-transferase, subunit A; K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
3-oxoacid CoA-transferase, subunit A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISI4_KORVE
3-oxoacid CoA-transferase subunit A
13_1_40cm_2_scaffold_679_15

Not on your lists

comp(10960..11745)
DNA (786bp) protein (262aa)
Prephenate dehydrogenase (TyrA2) {ECO:0000313|EMBL:AIF14886.1}; EC=1.3.1.12 {ECO:0000313|EMBL:AIF14886.1};; TaxID=1456242 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured
prephenate dehydrogenase n=1 Tax=Salisaeta longa RepID=UPI0003B34774
tyrA; prephenate dehydrogenase
13_1_40cm_2_scaffold_679_16
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(11747..12025)
DNA (279bp) protein (93aa)
Chorismate mutase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
Chorismate mutase
Chorismate mutase id=4016947 bin=GWC2_Pelobacter_58_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_2_scaffold_679_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12022..12828)
DNA (807bp) protein (269aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=454194 species="B
tryptophan synthase subunit alpha (EC:4.2.1.20)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037702E5
13_1_40cm_2_scaffold_679_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12838..14004)
DNA (1167bp) protein (389aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000256|SAAS:SAAS00015859};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobac
trpB; tryptophan synthase subunit beta TrpB (EC:4.2.1.20)
tryptophan synthase subunit alpha n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003670A30
13_1_40cm_2_scaffold_679_19
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14001..14630)
DNA (630bp) protein (210aa)
trpF; N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24); K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] Tax=GWA2_Deltaproteobacteria_54_12_curated
N-(5'-phosphoribosyl)anthranilate isomerase id=4714996 bin=GWC2_Nitrospirae-rel_56_14 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
trpF; N-(5'-phosphoribosyl)anthranilate isomerase
13_1_40cm_2_scaffold_679_20
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(14627..15418)
DNA (792bp) protein (264aa)
Indole-3-glycerol phosphate synthase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GVY7_9GAMM
indole-3-glycerol phosphate synthase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
indole-3-glycerol phosphate synthase
13_1_40cm_2_scaffold_679_21
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(15433..16440)
DNA (1008bp) protein (336aa)
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18) id=14626074 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18) Tax=CSP1_6_Rokubacteria
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
13_1_40cm_2_scaffold_679_22
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16437..16994)
DNA (558bp) protein (186aa)
Anthranilate synthase subunit II {ECO:0000313|EMBL:EST51678.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EST51678.1};; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibac
Anthranilate synthase subunit II n=1 Tax=Brevibacillus panacihumi W25 RepID=V6M8L5_9BACL
pabA; para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II
13_1_40cm_2_scaffold_679_23
RLO_PLX_64_10, Bacteria

Not on your lists

comp(16991..18433)
DNA (1443bp) protein (481aa)
anthranilate synthase subunit I n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B6DB9D rbh
anthranilate synthase component I Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
anthranilate synthase, component I
13_1_40cm_2_scaffold_679_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18583..19197)
DNA (615bp) protein (205aa)
phosphoribosyl-ATP pyrophosphatase n=1 Tax=Laceyella sacchari RepID=UPI0003B3DA11
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas meth
hisI; phosphoribosyl-AMP cyclohydrolase;phosphoribosyl-ATP diphosphatase
13_1_40cm_2_scaffold_679_25
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(19194..19946)
DNA (753bp) protein (251aa)
imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase [EC:4.1.3.-] Tax=RBG_16_Spirochaetes_49_21_curated
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CJT6_9FIRM
Imidazole glycerol phosphate synthase cyclase subunit
13_1_40cm_2_scaffold_679_26
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19936..20658)
DNA (723bp) protein (241aa)
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VMI4_CLOSH
13_1_40cm_2_scaffold_679_27

Not on your lists

comp(20655..21272)
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM62790.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Imidazole glycerol phosphate synthase subunit HisH id=4724814 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hisH; imidazole glycerol phosphate synthase subunit HisH
13_1_40cm_2_scaffold_679_28
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21282..21866)
DNA (585bp) protein (195aa)
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=HIS7_MAGSM
13_1_40cm_2_scaffold_679_29
RLO_PLX_64_10, Bacteria

Not on your lists

comp(21853..22941)
DNA (1089bp) protein (363aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9); K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFI7_CHLTF
13_1_40cm_2_scaffold_679_30
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(22904..24193)
DNA (1290bp) protein (430aa)
Histidinol-phosphate transaminase {ECO:0000256|SAAS:SAAS00083672}; EC=2.6.1.9 {ECO:0000256|SAAS:SAAS00083672};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.
histidinol dehydrogenase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B2E95C
histidinol dehydrogenase
Displaying items 1-30 of 47 in total

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