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13_1_40cm_2_scaffold_7254

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_7254_1
unknown

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comp(3..245)
DNA (243bp) protein (81aa)

This feature has no annotations

13_1_40cm_2_scaffold_7254_2
unknown

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comp(727..1035)
DNA (309bp) protein (103aa)

This feature has no annotations

13_1_40cm_2_scaffold_7254_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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2075..3049
DNA (975bp) protein (325aa)
ParB domain protein nuclease n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BB7_SOLUE
nuclease
ParB domain protein nuclease {ECO:0000313|EMBL:ABJ81649.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter us
13_1_40cm_2_scaffold_7254_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3482..3697
DNA (216bp) protein (72aa)
UPI0003CE1E21 related cluster n=1 Tax=unknown RepID=UPI0003CE1E21
Integrase {ECO:0000313|EMBL:KJB90556.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 116
putative integrase/recombinase
13_1_40cm_2_scaffold_7254_5
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3799..4437
DNA (639bp) protein (213aa)
Putative integrase/recombinase n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7D7X9_9ALTE
Putative integrase/recombinase {ECO:0000313|EMBL:EHJ06149.1}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobac
putative integrase/recombinase
13_1_40cm_2_scaffold_7254_6

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4503..4754
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EWL8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE09994.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative integrase/recombinase, phage integrase family
13_1_40cm_2_scaffold_7254_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4751..5737
DNA (987bp) protein (329aa)
Phage integrase n=1 Tax=Burkholderia sp. YI23 RepID=G8ML83_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KJB90557.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
phage integrase
13_1_40cm_2_scaffold_7254_8
Marinobacter manganoxydans, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5734..6300
DNA (567bp) protein (189aa)
Tyrosine-based site-specific recombinase n=1 Tax=Marinobacter manganoxydans MnI7-9 RepID=G6YWA5_9ALTE
Tyrosine-based site-specific recombinase {ECO:0000313|EMBL:EHJ03526.1}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source=
phage integrase
13_1_40cm_2_scaffold_7254_9
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6640..7878
DNA (1239bp) protein (413aa)
Phage-related integrase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8I6_AROAE
Integrase {ECO:0000313|EMBL:KDR38113.1}; Mobile element protein {ECO:0000313|EMBL:CDY73460.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Bur
int; putative integrase
13_1_40cm_2_scaffold_7254_10
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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7875..8819
DNA (945bp) protein (315aa)
Phage-related integrase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P8I7_AROAE
int; putative integrase
Phage-related integrase {ECO:0000313|EMBL:CAI06372.1}; Putative integrase {ECO:0000313|EMBL:CAI10623.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclacea
13_1_40cm_2_scaffold_7254_11
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8816..9298
DNA (483bp) protein (161aa)
Putative integrase/recombinase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q7WXS8_CUPNH
integrase/recombinase
Putative integrase/recombinase {ECO:0000313|EMBL:AAP85791.1}; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus
13_1_40cm_2_scaffold_7254_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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9289..9855
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BB8_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81648.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_2_scaffold_7254_13

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9842..10132
DNA (291bp) protein (97aa)
IstB ATP binding domain-containing protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1A314_9ZZZZ
IstB ATP binding domain-containing protein {ECO:0000313|EMBL:EQD36220.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage m
IstB ATP binding domain-containing protein
13_1_40cm_2_scaffold_7254_14

Not on your lists

10129..10572
DNA (444bp) protein (148aa)
IstB ATP binding domain-containing protein n=3 Tax=mine drainage metagenome RepID=T1BJL5_9ZZZZ
IstB ATP binding domain-containing protein {ECO:0000313|EMBL:EQD68703.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
IstB ATP binding domain-containing protein
13_1_40cm_2_scaffold_7254_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10590..10925
DNA (336bp) protein (112aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BC0_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81646.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_2_scaffold_7254_16
unknown

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comp(11008..11451)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_40cm_2_scaffold_7254_17
unknown

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comp(11396..11494)
DNA (99bp) protein (33aa)

This feature has no annotations

13_1_40cm_2_scaffold_7254_18
RIFOXYA1_FULL_Xanthomonadales_69_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11947..12303)
DNA (357bp) protein (119aa)
putative secreted protein; K07004 Tax=RIFOXYA1_FULL_Xanthomonadales_69_10_curated
Displaying 18 items

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