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13_1_40cm_2_scaffold_786

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_786_1
unknown

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comp(1..159)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_2_scaffold_786_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(162..1472)
DNA (1311bp) protein (437aa)
Thymidine phosphorylase {ECO:0000313|EMBL:CDM65503.1}; EC=2.4.2.4 {ECO:0000313|EMBL:CDM65503.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyr
Pyrimidine-nucleoside phosphorylase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H829_ANADF
pyrimidine-nucleoside phosphorylase
13_1_40cm_2_scaffold_786_3
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(1469..2353)
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=unclassified Opitutaceae RepID=I6AQV2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIP97393.1}; Flags: Precursor;; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
13_1_40cm_2_scaffold_786_4

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2377..2928
DNA (552bp) protein (184aa)
Appr-1-p processing domain protein n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V7J1_THELD
Marine sediment metagenome DNA, contig: S01H1_L07913 {ECO:0000313|EMBL:GAF78860.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Appr-1-p processing protein
13_1_40cm_2_scaffold_786_5
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

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2915..3430
DNA (516bp) protein (172aa)
adenylate cyclase; K05873 adenylate cyclase, class 2 [EC:4.6.1.1] id=16973968 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
adenylate cyclase; K05873 adenylate cyclase, class 2 [EC:4.6.1.1] Tax=RBG_13_Aminicenantes_62_12_curated
putative adenylate cyclase (EC:4.6.1.1)
13_1_40cm_2_scaffold_786_6
unknown

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3447..3767
DNA (321bp) protein (107aa)

This feature has no annotations

13_1_40cm_2_scaffold_786_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

4084..4836
DNA (753bp) protein (251aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
hypothetical protein id=12554596 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_2_scaffold_786_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

4885..5862
DNA (978bp) protein (326aa)
polysaccharide deacetylase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031E75F8
polysaccharide deacetylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
polysaccharide deacetylase
13_1_40cm_2_scaffold_786_9

Not on your lists

6288..6809
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BLR3 RepID=C0IN62_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACN58748.1}; TaxID=506521 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR3.;"
13_1_40cm_2_scaffold_786_10

Not on your lists

6827..7408
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BLR3 RepID=C0IN63_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ACN58749.1}; TaxID=506521 species="Bacteria; environmental samples.;" source="uncultured bacterium BLR3.;"
13_1_40cm_2_scaffold_786_11
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(7736..8404)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Chloroflexi bacterium SCGC AB-629-P13 RepID=UPI000367FDAE
cytochrome c assembly protein; K02195 heme exporter protein C Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
cytochrome c assembly protein
13_1_40cm_2_scaffold_786_12
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(8406..9071)
DNA (666bp) protein (222aa)
Cytochrome c-type biogenesis protein CcmB n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TFT5_CALNY
ccmB; heme exporter protein CcmB; K02194 heme exporter protein B Tax=RBG_16_Acidobacteria_68_9_curated
cytochrome c-type biogenesis protein ccmb
13_1_40cm_2_scaffold_786_13
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(9068..9784)
DNA (717bp) protein (239aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E7E8_9ACTN
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBL03645.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" s
13_1_40cm_2_scaffold_786_14
unknown

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comp(9941..10276)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_2_scaffold_786_15
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(10276..10692)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NT61_GRAMM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_2_scaffold_786_16
RBG_16_Chloroflexi_58_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(10692..10982)
DNA (291bp) protein (97aa)
hypothetical protein; K02200 cytochrome c-type biogenesis protein CcmH Tax=RBG_16_Chloroflexi_58_8_curated
Cytochrome c-type biogenesis protein cycL id=4062401 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_786_17
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(11335..13371)
DNA (2037bp) protein (679aa)
Cytochrome c assembly protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YS1_SOLUE
cytochrome c assembly protein; K02198 cytochrome c-type biogenesis protein CcmF Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
cytochrome c assembly protein
13_1_40cm_2_scaffold_786_18
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13373..13807)
DNA (435bp) protein (145aa)
Putative cytochrome c-type biogenesis protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V4U1_TERSS
putative cytochrome c-type biogenesis protein
Putative cytochrome c-type biogenesis protein {ECO:0000313|EMBL:ADV82569.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" sourc
13_1_40cm_2_scaffold_786_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

14022..15104
DNA (1083bp) protein (361aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
Dehydrogenase E1 component n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIR5_RHOM4
dehydrogenase E1 component
13_1_40cm_2_scaffold_786_20
R_OD1_Yanofskybacteria_43_10b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(15067..15495)
DNA (429bp) protein (143aa)
Vitamin K epoxide reductase n=2 Tax=Arthrospira platensis RepID=K6CWD3_ARTPT
Vitamin K epoxide reductase Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_43_10b_curated
hypothetical protein
13_1_40cm_2_scaffold_786_21
Microgenomates bacterium GW2011_GWC1_39_7, Microgenomates, Bacteria

Not on your lists

comp(15492..16139)
DNA (648bp) protein (216aa)
DSBA oxidoreductase {ECO:0000313|EMBL:KKR25550.1}; TaxID=1618515 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_7.;"
dsbG; protein-disulfide isomerase id=4988 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Protein-disulfide isomerase
13_1_40cm_2_scaffold_786_22
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

16511..16915
DNA (405bp) protein (135aa)
7-cyano-7-deazaguanine reductase (EC:1.7.1.13); K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
queF; NADPH-dependent 7-cyano-7-deazaguanine reductase (EC:1.7.1.13)
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PBH8_9BACT
13_1_40cm_2_scaffold_786_23
unknown

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comp(16866..17339)
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_40cm_2_scaffold_786_24
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17398..19233)
DNA (1836bp) protein (612aa)
tktA; transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
tktA; transketolase (EC:2.2.1.1)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000372CAC8 rbh
13_1_40cm_2_scaffold_786_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(19290..20144)
DNA (855bp) protein (285aa)
Fumarylacetoacetate (FAA) hydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NL2_SOLUE
fumarylacetoacetate (FAA) hydrolase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
fumarylacetoacetate (FAA) hydrolase
13_1_40cm_2_scaffold_786_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

20225..21316
DNA (1092bp) protein (364aa)
N-acyl-D-aspartate/D-glutamate deacylase n=2 Tax=Congregibacter RepID=A4AAZ5_9GAMM
D-aminoacylase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
beta-lactamase
13_1_40cm_2_scaffold_786_27
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(21332..21958)
DNA (627bp) protein (209aa)
DNA-binding response regulator n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F666_ACIC5
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
DNA-binding response regulator
Displaying 27 items

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