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13_1_40cm_2_scaffold_10726

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_10726_1
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(10..486)
DNA (477bp) protein (159aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BEV1_METIK
ribosomal-protein-alanine acetyltransferase
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:AEF95687.1}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="
13_1_40cm_2_scaffold_10726_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(488..2101)
DNA (1614bp) protein (538aa)
lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] Tax=RBG_16_Archaea_50_20_curated
lysS; lysine--tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2F7_9ARCH
13_1_40cm_2_scaffold_10726_3
unknown

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2182..2577
DNA (396bp) protein (132aa)

This feature has no annotations

13_1_40cm_2_scaffold_10726_4
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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2678..3886
DNA (1209bp) protein (403aa)
GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RBG_13_Bathyarchaeota_38_9_curated
GMP synthase domain protein n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B9N9_ACIHW
GMP synthase
13_1_40cm_2_scaffold_10726_5
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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3958..4485
DNA (528bp) protein (176aa)
GMP synthase [glutamine-hydrolyzing] subunit A {ECO:0000256|HAMAP-Rule:MF_01510}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_01510};; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_01510}; TaxID=930
GMP synthase [glutamine-hydrolyzing] subunit A n=3 Tax=Sulfolobus RepID=GUAAA_SULSO
GMP synthase small subunit
13_1_40cm_2_scaffold_10726_6

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comp(4533..6017)
DNA (1485bp) protein (495aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00035F9E9B
Marine sediment metagenome DNA, contig: S01H1_L04025 {ECO:0000313|EMBL:GAF79609.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_2_scaffold_10726_7
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(6114..8852)
DNA (2739bp) protein (913aa)
AAA ATPase (EC:3.6.4.3)
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:ADN49467.1}; EC=3.6.4.3 {ECO:0000313|EMBL:ADN49467.1};; TaxID=572478 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteace
AAA family ATPase, CDC48 subfamily n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QRU2_VULDI
13_1_40cm_2_scaffold_10726_8
unknown

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comp(8856..9725)
DNA (870bp) protein (290aa)

This feature has no annotations

13_1_40cm_2_scaffold_10726_9
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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9960..10520
DNA (561bp) protein (187aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_2_scaffold_10726_10
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10522..11121)
DNA (600bp) protein (200aa)
Dimethylamine corrinoid protein MtbC n=2 Tax=Desulfotignum phosphitoxidans RepID=S0FSB2_9DELT
Putative corrinoid protein {ECO:0000313|EMBL:ADB92522.1}; TaxID=190898 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="Desulfoti
cobalamin B12-binding domain-containing protein
13_1_40cm_2_scaffold_10726_11
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(11127..11987)
DNA (861bp) protein (287aa)
3-hydroxybutyryl-CoA dehydrogenase; EC=1.1.1.157;; Beta-hydroxybutyryl-CoA dehydrogenase; Short=BHBD;; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacte
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=HBD_THETC
3-hydroxyacyl-CoA dehydrogenase
13_1_40cm_2_scaffold_10726_12
RBG_16_Archaea_50_20_curated, Archaea

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comp(11984..12706)
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N922_9ARCH
Restriction endonuclease family protein Tax=RBG_16_Archaea_50_20_curated
hypothetical protein
13_1_40cm_2_scaffold_10726_13
RBG_16_Archaea_50_20_curated, Archaea

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comp(12687..13895)
DNA (1209bp) protein (403aa)
Putative peptidase family M50 n=1 Tax=uncultured marine crenarchaeote HF4000_APKG10F15 RepID=B3TBU8_9ARCH
peptidase M50 Tax=RBG_16_Archaea_50_20_curated
zinc metalloprotease
13_1_40cm_2_scaffold_10726_14
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

14028..14537
DNA (510bp) protein (170aa)
Acetyltransferase n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU7_9CREN
ribosomal-protein-alanine acetyltransferase Tax=RBG_16_Archaea_50_20_curated
30S ribosomal protein S18P alanine acetyltransferase
13_1_40cm_2_scaffold_10726_15
unknown

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comp(14549..14749)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_2_scaffold_10726_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(14776..15039)
DNA (264bp) protein (88aa)
DNA-directed RNA polymerase, subunit K/omega (EC:2.7.7.6); K03014 DNA-directed RNA polymerases I, II, and III subunit RPABC2 Tax=RBG_13_Bathyarchaeota_38_9_curated
DNA-directed RNA polymerase subunit K n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A1X4_FERFK
RNA polymerase Rpb6
Displaying 16 items

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