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13_1_40cm_2_scaffold_376

Search features with annotation key words

Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_376_1
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2..1045
DNA (1044bp) protein (348aa)
rfaEa; d-beta-d-heptose 7-phosphate kinase (EC:2.7.1.-) Tax=GWB2_Deltaproteobacteria_55_19_curated
D-beta-D-heptose 7-phosphate kinase, domain I of bifunctional protein HldE id=1871886 bin=GWB2_Proteobacteria_55_19 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
PfkB domain-containing protein
13_1_40cm_2_scaffold_376_2
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

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1048..1875
DNA (828bp) protein (276aa)
Transketolase domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XCS1_THEPJ
transketolase
Transketolase domain protein {ECO:0000313|EMBL:ADG83597.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR)
13_1_40cm_2_scaffold_376_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1925..2866
DNA (942bp) protein (314aa)
Transketolase, C-terminal section (EC:2.2.1.1) Tax=GWF2_RBX1_38_17_curated
transketolase, alpha subunit (EC:2.2.1.1)
Transketolase, C-terminal section id=1899714 bin=GWD2_RBX1-related_39_127 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17 rbh
13_1_40cm_2_scaffold_376_4
Methanocaldococcus infernus, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

2874..3575
DNA (702bp) protein (234aa)
transaldolase (EC:2.2.1.2)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=573063 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcac
Probable transaldolase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VTU6_METIM
13_1_40cm_2_scaffold_376_5
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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3730..5286
DNA (1557bp) protein (519aa)
pyrG; CTP synthetase (EC:6.3.4.2) Tax=RBG_13_Bathyarchaeota_38_9_curated
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=2 Tax=Pyrococcus furiosus RepID=PYRG_PYRFU
13_1_40cm_2_scaffold_376_6
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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5365..5871
DNA (507bp) protein (169aa)
Pyridoxin-like ECF transporter substrate-specific component n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LIR2_THEBM
pyridoxin-like ECF transporter substrate-specific component Tax=RBG_16_Bathyarchaeota_48_13_curated
pyridoxin-like ECF transporter substrate-specific component
13_1_40cm_2_scaffold_376_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(5903..6142)
DNA (240bp) protein (80aa)
Putative snRNP Sm-like protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IID4_NITGG
small nuclear ribonucleoprotein; K04796 small nuclear ribonucleoprotein Tax=RBG_13_Bathyarchaeota_38_9_curated
putative snRNP Sm-like protein
13_1_40cm_2_scaffold_376_8
unknown

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6482..6700
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_2_scaffold_376_9
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

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7019..7816
DNA (798bp) protein (266aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=1198115 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeot
Endonuclease NucS n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U2L6_9ARCH
hypothetical protein
13_1_40cm_2_scaffold_376_10
unknown

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8291..8659
DNA (369bp) protein (123aa)

This feature has no annotations

13_1_40cm_2_scaffold_376_11
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9082..10449)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=3 Tax=unclassified Coccolithovirus RepID=V5LNQ6_9PHYC
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source=
infB; translation initiation factor IF-2
13_1_40cm_2_scaffold_376_12
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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10989..11981
DNA (993bp) protein (331aa)
DNA repair and recombination protein RadA n=1 Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAU1_9CREN
DNA recombination and repair protein, RecA-like protein Tax=RBG_13_Bathyarchaeota_38_9_curated
DNA repair protein RadA
13_1_40cm_2_scaffold_376_13
unknown

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12143..12436
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_40cm_2_scaffold_376_14
RBG_16_Archaea_50_20_curated, Archaea

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comp(12390..12815)
DNA (426bp) protein (142aa)
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_376_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

12906..13445
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI0003636EFA
signal-transduction protein Tax=RBG_16_Archaea_50_20_curated
CBS-domain-containing protein
13_1_40cm_2_scaffold_376_16
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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13384..14775
DNA (1392bp) protein (464aa)
dihydroorotase, multifunctional complex type (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
pyrC; Dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TTM2_9EURY
13_1_40cm_2_scaffold_376_17
Staphylothermus marinus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

14793..15272
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DP39_STAMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN70399.1}; TaxID=399550 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylothermus mar
13_1_40cm_2_scaffold_376_18
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

15266..15892
DNA (627bp) protein (209aa)
Protein MFS40622_1352 n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S5B5_METSF
AMMECR1 domain protein
Protein MFS40622_1352 {ECO:0000256|HAMAP-Rule:MF_00645}; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldoc
13_1_40cm_2_scaffold_376_19
unknown

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15973..16467
DNA (495bp) protein (165aa)

This feature has no annotations

13_1_40cm_2_scaffold_376_20

Not on your lists

16570..17346
DNA (777bp) protein (259aa)
tRNA methyltransferase complex GCD14 subunit (TRM61, GCD14) {ECO:0000313|EMBL:AIF16338.1}; EC=2.1.1.219 {ECO:0000313|EMBL:AIF16338.1};; TaxID=1456268 species="Archaea; Thaumarchaeota; environmental sa
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-L14 RepID=UPI00036D57CD
tRNA methyltransferase complex GCD14 subunit
13_1_40cm_2_scaffold_376_21
unknown

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17357..17635
DNA (279bp) protein (93aa)

This feature has no annotations

13_1_40cm_2_scaffold_376_22
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

comp(17695..19098)
DNA (1404bp) protein (468aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13 5.4.2.8); K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] Tax=RBG_16_Thaumarchaeota_49_8_curat
mpg1; putative mannose-1-phosphate guanyltransferase (EC:2.7.7.13)
Glucose-1-phosphate nucleotidyltransferase n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7EMX4_CLOPA
13_1_40cm_2_scaffold_376_23
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(19359..19730)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00036E1D68
Transcriptional regulator, PadR family
Transcriptional regulator, PadR family {ECO:0000313|EMBL:AIC15649.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
13_1_40cm_2_scaffold_376_24
Methanospirillum hungatei, Methanospirillum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19988..20482)
DNA (495bp) protein (165aa)
Response regulator receiver domain protein (CheY-like) n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FNF5_METHJ
response regulator receiver domain-containing protein
Response regulator receiver domain protein (CheY-like) {ECO:0000313|EMBL:ABD42883.1}; TaxID=323259 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanospirillaceae; Methanospi
13_1_40cm_2_scaffold_376_25
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

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comp(20490..20984)
DNA (495bp) protein (165aa)
integral membrane sensor signal transduction histidine kinase Tax=RBG_13_Chloroflexi_48_17_curated
Two-component sensor kinase id=4757883 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
sensory box histidine kinase
13_1_40cm_2_scaffold_376_26
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(20981..23821)
DNA (2841bp) protein (947aa)
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00158471}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00158471};; TaxID=28072 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source=
Methylase of chemotaxis methyl-accepting protein n=1 Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QT02_NOSS7
methylase of chemotaxis methyl-accepting protein
13_1_40cm_2_scaffold_376_27
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

23949..24770
DNA (822bp) protein (274aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF85252.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_2_scaffold_376_28
unknown

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24890..25201
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_40cm_2_scaffold_376_29
unknown

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25285..25485
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_40cm_2_scaffold_376_30
unknown

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26131..26673
DNA (543bp) protein (181aa)

This feature has no annotations

Displaying items 1-30 of 36 in total

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