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13_1_40cm_2_scaffold_1219

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1219_1
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..816)
DNA (816bp) protein (272aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Haloferax lucentense DSM 14919 RepID=M0GUT6_HALL2
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
hypothetical protein
13_1_40cm_2_scaffold_1219_2
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(875..2143)
DNA (1269bp) protein (423aa)
adenosylhomocysteinase (EC:3.3.1.1)
atm:ANT_16170 ahcY; adenosylhomocysteinase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] id=1247463 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi rbh
ahcY; adenosylhomocysteinase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
13_1_40cm_2_scaffold_1219_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2178..3326)
DNA (1149bp) protein (383aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=METK_CARHZ
13_1_40cm_2_scaffold_1219_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3412..6873)
DNA (3462bp) protein (1154aa)
DNA polymerase III, alpha subunit; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
DNA polymerase III, alpha subunit; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] id=12554058 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dnaE; DNA polymerase III DnaE (EC:2.7.7.7)
13_1_40cm_2_scaffold_1219_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(6887..8455)
DNA (1569bp) protein (523aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UK42_ANASK
guaA; GMP synthase
13_1_40cm_2_scaffold_1219_6
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(8452..9477)
DNA (1026bp) protein (342aa)
DNA polymerase III subunit delta (EC:2.7.7.7); K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
DNA polymerase III subunit delta (EC:2.7.7.7)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000374F5C2
13_1_40cm_2_scaffold_1219_7
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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comp(9485..10057)
DNA (573bp) protein (191aa)
hypothetical protein id=24434552 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
hypothetical protein
13_1_40cm_2_scaffold_1219_8
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10115..11515)
DNA (1401bp) protein (467aa)
leuS; leucine--tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:AJE04893.1}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:AJE04893.1};; Leucyl-tRNA synthetase {ECO:0000256|HAM
Leucine--tRNA ligase n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=SYL_GEOSL
13_1_40cm_2_scaffold_1219_9
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11512..12567)
DNA (1056bp) protein (352aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=178606 species="Bacteria; Nitrosp
leuS; leucine--tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase n=2 Tax=Leptospirillum sp. Group II RepID=B6ALQ6_9BACT
13_1_40cm_2_scaffold_1219_10
CG_Mariprof_01, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12774..13925
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QHF9_9CYAN
hypothetical protein Tax=CG_Mariprof_01
hypothetical protein
13_1_40cm_2_scaffold_1219_11

Not on your lists

13922..14239
DNA (318bp) protein (106aa)
Marine sediment metagenome DNA, contig: S03H2_S14865 {ECO:0000313|EMBL:GAH73156.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Putative uncharacterized protein id=3774694 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
13_1_40cm_2_scaffold_1219_12
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

14236..14892
DNA (657bp) protein (219aa)
putative Fe-S oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
Putative Fe-S oxidoreductase id=4185465 bin=GWC2_OP3_44_8 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
putative Fe-S oxidoreductase
13_1_40cm_2_scaffold_1219_13

Not on your lists

14940..15488
DNA (549bp) protein (183aa)
Marine sediment metagenome DNA, contig: S12H4_S17227 {ECO:0000313|EMBL:GAJ04465.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_2_scaffold_1219_14
unknown

Not on your lists

15493..15684
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_2_scaffold_1219_15
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

15689..16639
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKP1_CHLTF
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
hypothetical protein
13_1_40cm_2_scaffold_1219_16

Not on your lists

16636..17073
DNA (438bp) protein (146aa)
Marine sediment metagenome DNA, contig: S01H1_S31943 {ECO:0000313|EMBL:GAG32179.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Two component, sigma54 specific, transcriptional regulator, Fis family id=4711585 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Fis family transcriptional regulator
13_1_40cm_2_scaffold_1219_17
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

17039..19393
DNA (2355bp) protein (785aa)
Putative uncharacterized protein id=4205768 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative HD-GYP hydrolase domain containing protein
Tax=BJP_IG2102_Elusimicrobia_52_42
13_1_40cm_2_scaffold_1219_18
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19390..20841
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI0003811D9C
polysaccharide export protein; K01991 polysaccharide export outer membrane protein Tax=CG_Delta_01
polysaccharide export protein
13_1_40cm_2_scaffold_1219_19
unknown

Not on your lists

20843..20923
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 19 items

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