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13_1_40cm_2_scaffold_11921

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_11921_1
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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3..899
DNA (897bp) protein (299aa)
Peptidase M24 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9X6_9BACT
peptidase M24 Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
peptidase M24
13_1_40cm_2_scaffold_11921_2
unknown

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comp(896..1393)
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_40cm_2_scaffold_11921_3
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

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comp(1390..1698)
DNA (309bp) protein (103aa)
squalene-associated FAD-dependent desaturase (EC:1.14.99.30) Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
Squalene-associated FAD-dependent desaturase id=4176856 bin=GWC2_Ignavibacteria_56_12 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hopC; squalene/phytoene dehydrogenase
13_1_40cm_2_scaffold_11921_4
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

comp(1695..2723)
DNA (1029bp) protein (343aa)
squalene-associated FAD-dependent desaturase (EC:1.14.99.30) Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
squalene-associated FAD-dependent desaturase (EC:1.14.99.30)
Squalene-associated FAD-dependent desaturase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LL71_CHLTF
13_1_40cm_2_scaffold_11921_5
CSP1_5_NC10, NC10, Bacteria

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comp(2745..3629)
DNA (885bp) protein (295aa)
crtB; phytoene synthase (EC:2.5.1.32)
squalene/phytoene synthase id=14430542 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
squalene/phytoene synthase Tax=CSP1_5_NC10
13_1_40cm_2_scaffold_11921_6

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comp(3626..4564)
DNA (939bp) protein (313aa)
phytoene synthase-like protein (EC:2.5.1.-)
Squalene/phytoene synthase n=1 Tax=uncultured bacterium RepID=K1YEB5_9BACT
Squalene/phytoene synthase {ECO:0000313|EMBL:EKD41215.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_2_scaffold_11921_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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4612..6039
DNA (1428bp) protein (476aa)
gapD; succinate semialdehyde dehydrogenase (EC:1.2.1.16) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
gapD; succinate semialdehyde dehydrogenase (EC:1.2.1.16)
Succinate semialdehyde dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P812_9BACT
13_1_40cm_2_scaffold_11921_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6182..6766
DNA (585bp) protein (195aa)
RNA polymerase sigma-70 factor, ECF subfamily protein n=1 Tax=mine drainage metagenome RepID=E6Q3G7_9ZZZZ
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
RNA polymerase sigma-E factor
13_1_40cm_2_scaffold_11921_9
unknown

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6763..7284
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_40cm_2_scaffold_11921_10
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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7296..8342
DNA (1047bp) protein (349aa)
hypothetical protein id=16894176 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
RDD domain-containing protein
13_1_40cm_2_scaffold_11921_11
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(8475..10472)
DNA (1998bp) protein (666aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003629FAE
TonB-dependent receptor plug Tax=GWB2_Ignavibacteria_35_6b_curated
13_1_40cm_2_scaffold_11921_12
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10684..11418)
DNA (735bp) protein (245aa)
Benzoyl-CoA oxygenase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XPE9_SORCE
Benzoyl-CoA oxygenase component B {ECO:0000313|EMBL:AKF05474.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" sourc
benzoyl-CoA oxygenase
13_1_40cm_2_scaffold_11921_13
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11985..13649)
DNA (1665bp) protein (555aa)
crotonase (EC:4.2.1.17)
Crotonase {ECO:0000313|EMBL:AGP34390.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AGP34390.1};; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; So
Crotonase n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XRA8_SORCE
13_1_40cm_2_scaffold_11921_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13710..15680
DNA (1971bp) protein (657aa)
carbon starvation protein CstA; K06200 carbon starvation protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
carbon starvation protein CstA; K06200 carbon starvation protein id=14426070 bin=bin1_lowGC species=Desulfotomaculum nigrificans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
cstA-1; carbon starvation protein CstA
13_1_40cm_2_scaffold_11921_15
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15504..16550)
DNA (1047bp) protein (349aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO82426.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
YdjC id=2262036 bin=GWB2_Chloroflexi_54_36 species=Bacillus cereus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
13_1_40cm_2_scaffold_11921_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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16579..17715
DNA (1137bp) protein (379aa)
Putative hydrolase n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DD75_MYXXD
Predicted membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:CDM65558.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methyla
hydrolase
13_1_40cm_2_scaffold_11921_17
RLO_PLX_64_10, Bacteria

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comp(17742..18659)
DNA (918bp) protein (306aa)
Radical SAM domain protein id=1742856 bin=GWD2_Deltaproteobacteria_55_8 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria rbh
radical SAM domain-containing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
radical SAM domain-containing protein
13_1_40cm_2_scaffold_11921_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

18681..19355
DNA (675bp) protein (225aa)
mutY; a/g-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9EQ53_SORC5 id=5224798 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
13_1_40cm_2_scaffold_11921_19
unknown

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19403..19651
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_2_scaffold_11921_20
CG_Omnitr_05, Omnitrophica, Bacteria

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19688..20101
DNA (414bp) protein (138aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=CG_Omnitr_05
6-pyruvoyl tetrahydrobiopterin synthase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5EA6F
hypothetical protein
13_1_40cm_2_scaffold_11921_21
unknown

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20133..20543
DNA (411bp) protein (137aa)

This feature has no annotations

Displaying 21 items

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