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13_1_40cm_2_scaffold_1686

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Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1686_1
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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comp(1..489)
DNA (489bp) protein (163aa)
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML69_9BACT
periplasmic sensor signal transduction histidine kinase Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
periplasmic sensor signal transduction histidine kinase
13_1_40cm_2_scaffold_1686_2
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

comp(618..1454)
DNA (837bp) protein (279aa)
hypothetical protein Tax=RBG_13_Caldithrix_44_9_curated
13_1_40cm_2_scaffold_1686_3
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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1563..2768
DNA (1206bp) protein (402aa)
MinD-related ATP-binding protein id=3738387 bin=GWC2_Nitrospirae_57_13 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
ATP-binding protein; K04562 flagellar biosynthesis protein FlhG Tax=GWC2_Nitrospirae_57_13_curated
ATP-binding protein
13_1_40cm_2_scaffold_1686_4
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

2931..3848
DNA (918bp) protein (306aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH77_CHLTF
diguanylate cyclase domain-containing protein
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:AEP11819.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium
13_1_40cm_2_scaffold_1686_5
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

3859..4794
DNA (936bp) protein (312aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH77_CHLTF
diguanylate cyclase domain-containing protein
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:AEP11819.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium
13_1_40cm_2_scaffold_1686_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(4791..6161)
DNA (1371bp) protein (457aa)
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:CDM66977.1}; EC=2.3.3.13 {ECO:0000313|EMBL:CDM66977.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4;
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 id=5224560 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
2-isopropylmalate synthase
13_1_40cm_2_scaffold_1686_7
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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6205..6996
DNA (792bp) protein (264aa)
Hypothetical exported protein id=3343157 bin=GWC2_Deltaproteobacteria_42_51 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
13_1_40cm_2_scaffold_1686_8
unknown

Not on your lists

7044..7745
DNA (702bp) protein (234aa)

This feature has no annotations

13_1_40cm_2_scaffold_1686_9
unknown

Not on your lists

7806..8321
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_40cm_2_scaffold_1686_10
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8332..9135)
DNA (804bp) protein (268aa)
ABC transporter permease protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LVT8_SYNAS
ABC-2 type transporter; K09694 lipooligosaccharide transport system permease protein Tax=RBG_13_Deltaproteobacteria_47_9_curated
ABC transporter permease
13_1_40cm_2_scaffold_1686_11
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9132..10043)
DNA (912bp) protein (304aa)
ABC transporter ATP-binding protein id=4306259 bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria rbh
ABC transporter ATP-binding protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
Displaying 11 items

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