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13_1_40cm_2_scaffold_387

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_387_1
unknown

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comp(2..562)
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_40cm_2_scaffold_387_2
Arabidopsis thaliana, Arabidopsis, Brassicales, rosids, Streptophyta, Viridiplantae

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comp(559..1677)
DNA (1119bp) protein (373aa)
Genomic DNA, chromosome 3, P1 clone: MLD14 n=2 Tax=Arabidopsis thaliana RepID=Q9LT74_ARATH
late embryogenesis abundant protein-like protein
Late embryogenesis abundant protein-like protein {ECO:0000313|EMBL:AEE76239.1}; TaxID=3702 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eud
13_1_40cm_2_scaffold_387_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(1674..3164)
DNA (1491bp) protein (497aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
TPR repeat id=4221516 bin=GWA2_Methylomirabilis_73_35 species=Methanocella paludicola genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_387_4
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3164..5413)
DNA (2250bp) protein (750aa)
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.4.12) id=12554754 bin=CNBR_ACIDO species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geo
ATP-dependent DNA helicase PcrA
13_1_40cm_2_scaffold_387_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(5458..7338)
DNA (1881bp) protein (627aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT00_KORVE
glutamine--fructose-6-phosphate transaminase
13_1_40cm_2_scaffold_387_6
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7382..8782)
DNA (1401bp) protein (467aa)
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase (EC:2.3.1.157)
Bifunctional protein GlmU n=2 Tax=Geobacter metallireducens RepID=GLMU_GEOMG
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geo
13_1_40cm_2_scaffold_387_7
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(9327..9881)
DNA (555bp) protein (185aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein id=16981287 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
hypothetical protein
13_1_40cm_2_scaffold_387_8
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10001..10531
DNA (531bp) protein (177aa)
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=RBG_13_Deltaproteobacteria_53_10_curated
7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LTA4_SYNAS
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase
13_1_40cm_2_scaffold_387_9
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10559..11218
DNA (660bp) protein (220aa)
Deoxynucleoside kinase family protein Tax=RBG_16_Deltaproteobacteria_50_11_curated
Deoxynucleoside kinase id=3449606 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Deoxynucleoside kinase family protein
13_1_40cm_2_scaffold_387_10
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11302..12192
DNA (891bp) protein (297aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I1N7_DESAP
3-methyl-2-oxobutanoate hydroxymethyltransferase Tax=S_Thermacetogenium_phaeum_55_64
13_1_40cm_2_scaffold_387_11
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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12203..13042
DNA (840bp) protein (280aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094332}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAA
Pantothenate synthetase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CMZ3_DESK7
pantothenate synthetase
13_1_40cm_2_scaffold_387_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13039..13752)
DNA (714bp) protein (238aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=454194 species="Bacteria; Ac
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKB7_CHLTF
13_1_40cm_2_scaffold_387_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(13749..14690)
DNA (942bp) protein (314aa)
methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE18_CHLTF
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
13_1_40cm_2_scaffold_387_14
unknown

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comp(14687..15355)
DNA (669bp) protein (223aa)

This feature has no annotations

13_1_40cm_2_scaffold_387_15
unknown

Not on your lists

comp(15503..15721)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_2_scaffold_387_16
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

15940..17121
DNA (1182bp) protein (394aa)
acetyl-CoA acetyltransferase family protein; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Acetyl-CoA acetyltransferase family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1FAB1_ACIC5
acetyl-CoA acetyltransferase family protein
13_1_40cm_2_scaffold_387_17
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17199..18044
DNA (846bp) protein (282aa)
mmgB; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Bacillus amyloliquefaciens subsp. plantarum UCMB5113 RepID=S6F6D7_BACAM
3-hydroxyacyl-CoA dehydrogenase Tax=RBG_13_Deltaproteobacteria_53_10_curated
13_1_40cm_2_scaffold_387_18
R_NC10_66_22, NC10, Bacteria

Not on your lists

18041..21103
DNA (3063bp) protein (1021aa)
Helicase family protein with metal-binding cysteine cluster n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GN83_9DELT rbh
DEAD/DEAH box helicase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
13_1_40cm_2_scaffold_387_19
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21223..21498
DNA (276bp) protein (92aa)
transcriptional regulator n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B4C44F
DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=RBG_13_Deltaproteobacteria_65_10_curated
DNA-binding protein
13_1_40cm_2_scaffold_387_20
unknown

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21502..21954
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_40cm_2_scaffold_387_21
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(21977..23323)
DNA (1347bp) protein (449aa)
tRNA 2-methylthioadenosine synthase -like protein id=14625896 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
tRNA 2-methylthioadenosine synthase -like protein Tax=CSP1_6_Rokubacteria
tRNA 2-methylthioadenosine synthase-like protein
13_1_40cm_2_scaffold_387_22
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23326..23883)
DNA (558bp) protein (186aa)
phosphoribosylcarboxyaminoimidazole; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] Tax=GWA2_Deltaproteobacteria_54_12_curated
purD; phosphoribosylamine--glycine ligase (glycinamide ribonucleotide synthetase) PurD (EC:6.3.4.13)
phosphoribosylamine--glycine ligase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B66D86
13_1_40cm_2_scaffold_387_23
unknown

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comp(23979..24254)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_2_scaffold_387_24
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(24342..25622)
DNA (1281bp) protein (427aa)
PurD; phosphoribosylamine-glycine ligase; K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=RBG_16_Acidobacteria_70_10_curated
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI000376691F
13_1_40cm_2_scaffold_387_25
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

Not on your lists

25915..27579
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A7Y2_NATTJ
hypothetical protein Tax=RBG_16_Zixibacteria_48_11_curated
hypothetical protein
Displaying 25 items

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