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13_1_40cm_2_scaffold_232_28

Organism: 13_1_40CM_2_Acidobacteria_68_5

partial RP 18 / 55 BSCG 16 / 51 ASCG 6 / 38
Location: comp(29694..30557)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-32 subunit RpoH; K03086 RNA polymerase primary sigma factor Tax=RBG_13_OP8X_37_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 278.0
  • Bit_score: 318
  • Evalue 8.50e-84
sigma-70 family RNA polymerase sigma factor id=16858053 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 279.0
  • Bit_score: 278
  • Evalue 9.10e-72
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 288.0
  • Bit_score: 260
  • Evalue 4.20e-67

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Taxonomy

RBG_13_OP8X_37_8_curated → OP8X → Bacteria

Sequences

DNA sequence
Length: 864
GTGGAAGAAGAACGGGCGGCCGGCAAGCGCACAGCCGTGTCCTCGGAGACCCTGAAGAAGTATCTTCAGGAGATCTCGAAGCTACCGCGCATCACGCCCGACGAGGAAAAGGTTCTCGGGGATCGCATCCAGAAGGGGGACAGGGATGCGCTGCGCAAGCTGGTCGAGGCGAACCTGCGATTCGTGGTGAGCTTCGCCAAGAAATACCGCAACTGCGGGCTGTCCTTTCTCGACCTCATCAACGAAGGGAACATCGGCCTGATCGAGGCCGCGAAGCGCTTCAACCCCAAGAAGAACGTCAAGTTCATCACCTACGCCGTGTGGTGGGTGCGCCAGGCGATCATCCACGCGCTGTCCGATCAGAGCGGGGCGTTCCGGCTGCCGCAGAAGCAGGCCAACCTCCTGTATCGCATCGGCAAGACGATCTCGCAGCTGACGCTCGACCTCGAGCGCAACCCGACGCCGGAGGAGATCGCCGGGAAGCTGGGCATCCCGGTGGAGGAGGTCACCGGTCTGCTGCAGGTGGCCGACGAGAACGTCTCTCTGTCCACGGTGATCGACGAGGAGCACGAGTTCCACCTTTCGGACAAGCTCGAGCAGGACGTGATCCCGCCGGCCGACATGGCCCTGCTGCGATCCTCTCTCAAGGACCATCTGTACGCCTGTCTGGGAGAGCTCGACCCGAAGGAGCAGAAGGTGCTGCGGCTGCGATTCGGTCTGGACGAAGGAGAGCCCAAGACGCTCAAGGAAATCGGCGAGATGATGGGGCTGTCGCGCGAGCGCATCCGCCAGATCGAGGCCCAGGCGCTGGAGAAGCTGAATCGCTCGCAGAAGTGCCAGCAGTTGCAGGGTTATCTGAACTGA
PROTEIN sequence
Length: 288
VEEERAAGKRTAVSSETLKKYLQEISKLPRITPDEEKVLGDRIQKGDRDALRKLVEANLRFVVSFAKKYRNCGLSFLDLINEGNIGLIEAAKRFNPKKNVKFITYAVWWVRQAIIHALSDQSGAFRLPQKQANLLYRIGKTISQLTLDLERNPTPEEIAGKLGIPVEEVTGLLQVADENVSLSTVIDEEHEFHLSDKLEQDVIPPADMALLRSSLKDHLYACLGELDPKEQKVLRLRFGLDEGEPKTLKEIGEMMGLSRERIRQIEAQALEKLNRSQKCQQLQGYLN*