ggKbase home page

13_1_40cm_2_scaffold_1459

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1459_1
unknown

Not on your lists

3..95
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_40cm_2_scaffold_1459_2
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105..521
DNA (417bp) protein (139aa)
general secretion pathway protein G n=1 Tax=unclassified candidate division EM 19 RepID=UPI0003B4AC99
gspG; general secretion pathway protein G
General secretion pathway protein G {ECO:0000313|EMBL:ACE84631.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvib
13_1_40cm_2_scaffold_1459_3
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

815..1117
DNA (303bp) protein (101aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CBX8_MYXFH
hypothetical protein; K02457 general secretion pathway protein H Tax=RBG_16_Anaeromyxobacter_69_14_curated
prepilin-type N-terminal cleavage/methylation domain-containing protein
13_1_40cm_2_scaffold_1459_4
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1114..1821
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2INS6_ANADE
hypothetical protein; K02458 general secretion pathway protein I Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_2_scaffold_1459_5
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1818..2477
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H891_ANADF
hypothetical protein; K02459 general secretion pathway protein J Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_2_scaffold_1459_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2480..3046
DNA (567bp) protein (189aa)
General secretion pathway protein K n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08NC6_STIAD
hypothetical protein; K02460 general secretion pathway protein K Tax=RBG_16_Anaeromyxobacter_69_14_curated
gspK; general secretion pathway protein K
13_1_40cm_2_scaffold_1459_7
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3096..3713
DNA (618bp) protein (206aa)
General secretion pathway protein K n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08NC6_STIAD
General secretion pathway protein GspK {ECO:0000313|EMBL:KFA92474.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacte
gspK; general secretion pathway protein K
13_1_40cm_2_scaffold_1459_8
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3713..5158
DNA (1446bp) protein (482aa)
Fimbrial assembly family protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H889_ANADF
fimbrial assembly family protein
Fimbrial assembly family protein {ECO:0000313|EMBL:ABS24935.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxoba
13_1_40cm_2_scaffold_1459_9
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5158..5718
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H888_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS24934.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_2_scaffold_1459_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5718..6647
DNA (930bp) protein (310aa)
Putative membrane protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GDP0_SORC5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CAN99381.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium
13_1_40cm_2_scaffold_1459_11
unknown

Not on your lists

6663..7211
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_40cm_2_scaffold_1459_12
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7223..7891)
DNA (669bp) protein (223aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000255|HAMAP-Rule:MF_01200}; EC=4.1.1.23 {ECO:0000255|HAMAP-Rule:MF_01200};; OMP decarboxylase {ECO:0000255|HAMAP-Rule:MF_01200}; Short=OMPDCase {ECO:0000255
Orotidine 5'-phosphate decarboxylase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=PYRF_ANASK
13_1_40cm_2_scaffold_1459_13
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7888..9630)
DNA (1743bp) protein (581aa)
Proline--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_01569}; EC=6.1.1.15 {ECO:0000255|HAMAP-Rule:MF_01569};; Prolyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_01569}; Short=ProRS {ECO:0000255|HAMAP-Rule:MF
Proline--tRNA ligase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=SYP_ANADF rbh
prolyl-tRNA synthetase
13_1_40cm_2_scaffold_1459_14
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9679..10743)
DNA (1065bp) protein (355aa)
DsbA oxidoreductase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IGK3_ANADE rbh
DSBA oxidoreductase
DSBA oxidoreductase {ECO:0000313|EMBL:ACG75265.1}; Flags: Precursor;; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaero
13_1_40cm_2_scaffold_1459_15
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10816..11253
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI0003827327
hypothetical protein Tax=RBG_16_Betaproteobacteria_58_11_curated
hypothetical protein
13_1_40cm_2_scaffold_1459_16
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

11392..12609
DNA (1218bp) protein (406aa)
Sodium/calcium exchanger membrane region n=1 Tax=Micromonospora sp. (strain L5) RepID=E8SBB0_MICSL
sodium/calcium exchanger membrane subunit
hypothetical protein; K07301 inner membrane protein Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
13_1_40cm_2_scaffold_1459_17
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12561..13490)
DNA (930bp) protein (310aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS0004138
UDP-3-0-acyl N-acetylglucosamine deacetylase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JF07_ANAD2
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
13_1_40cm_2_scaffold_1459_18
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13539..15101)
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UJW2_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC46739.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
13_1_40cm_2_scaffold_1459_19
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15101..16135)
DNA (1035bp) protein (345aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteri
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PPX0_9DELT rbh
ruvB; Holliday junction DNA helicase RuvB
13_1_40cm_2_scaffold_1459_20
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16212..16820)
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000255|HAMAP-Rule:MF_00031}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00031};; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=RUVA_ANAD2
Holliday junction DNA helicase RuvA
13_1_40cm_2_scaffold_1459_21
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16817..17356)
DNA (540bp) protein (180aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MQT0_CORCM
ruvC; crossover junction endodeoxyribonuclease RuvC
13_1_40cm_2_scaffold_1459_22
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17353..18108)
DNA (756bp) protein (252aa)
Probable transcriptional regulatory protein STAUR_5782 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08W67_STIAD rbh
hypothetical protein
Probable transcriptional regulatory protein STAUR_5782 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobact
13_1_40cm_2_scaffold_1459_23
unknown

Not on your lists

comp(18173..19564)
DNA (1392bp) protein (464aa)

This feature has no annotations

Displaying 23 items

View Taxonomy