ggKbase home page

13_1_40cm_2_scaffold_15023

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_15023_1
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104..1795)
DNA (1692bp) protein (564aa)
Collagen alpha 1(I) chain n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PC15_9DELT
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFA92110.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystoba
hypothetical protein
13_1_40cm_2_scaffold_15023_2
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1796..2200)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=2 Tax=Myxococcus xanthus RepID=Q1D2Q6_MYXXD
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_2_scaffold_15023_3
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2274..3536)
DNA (1263bp) protein (421aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TNU6_9DELT rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
13_1_40cm_2_scaffold_15023_4
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3536..4426)
DNA (891bp) protein (297aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
Release factor glutamine methyltransferase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MQW8_CORCM
hemK; putative protein methyltransferase HemK
13_1_40cm_2_scaffold_15023_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4386..5234)
DNA (849bp) protein (283aa)
Release factor glutamine methyltransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMV9_ANADE
Putative N(5)-glutamine methyltransferase PrmC {ECO:0000313|EMBL:AKF06220.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandarac
HemK family modification methylase
13_1_40cm_2_scaffold_15023_6
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5231..6304)
DNA (1074bp) protein (358aa)
Peptide chain release factor 1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=RF1_ANADE
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cyst
13_1_40cm_2_scaffold_15023_7
unknown

Not on your lists

6866..7063
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_40cm_2_scaffold_15023_8
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7112..8623
DNA (1512bp) protein (504aa)
Probable cytosol aminopeptidase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MQU0_CORCM rbh
pepA1; cytosol aminopeptidase
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1144275 spec
13_1_40cm_2_scaffold_15023_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8625..8894)
DNA (270bp) protein (90aa)
Peptidase M24 n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QX86_ISOPI
peptidase M24 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
peptidase M24
Displaying 9 items

View Taxonomy