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13_1_40cm_2_scaffold_5873

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Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_5873_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7..990)
DNA (984bp) protein (328aa)
Peptidase C14, caspase catalytic subunit p20 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q212G2_RHOPB
peptidase C14, caspase catalytic subunit p20
Peptidase C14, caspase catalytic subunit p20 {ECO:0000313|EMBL:ABD88724.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhod
13_1_40cm_2_scaffold_5873_2
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1066..1527)
DNA (462bp) protein (154aa)
zinc-binding CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=RBG_16_Anaeromyxobacter_69_14_curated
CMP/dCMP deaminase zinc-binding n=3 Tax=Anaeromyxobacter RepID=B4UEG9_ANASK
zinc-binding CMP/dCMP deaminase
13_1_40cm_2_scaffold_5873_3
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1561..2364)
DNA (804bp) protein (268aa)
Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2II41_ANADE
peptidase S1 and S6, chymotrypsin/Hap Tax=RBG_16_Anaeromyxobacter_69_14_curated
peptidase S1 and S6, chymotrypsin/Hap
13_1_40cm_2_scaffold_5873_4
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2476..3399
DNA (924bp) protein (308aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cy
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000373BDC5
histidine kinase
13_1_40cm_2_scaffold_5873_5
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

3418..4044
DNA (627bp) protein (209aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NZY2_9DELT
two-component response regulator Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
LuxR family transcriptional regulator
13_1_40cm_2_scaffold_5873_6
unknown

Not on your lists

4075..5145
DNA (1071bp) protein (357aa)

This feature has no annotations

13_1_40cm_2_scaffold_5873_7
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5133..5594)
DNA (462bp) protein (154aa)
PrkA serine kinase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08Z64_STIAD
Putative serine protein kinase, PrkA {ECO:0000313|EMBL:KFE70653.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;"
serine kinase PrkA
13_1_40cm_2_scaffold_5873_8
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5548..7326)
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U8D6_MYXSD
Serine protease {ECO:0000313|EMBL:KFA92303.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacte
hypothetical protein
13_1_40cm_2_scaffold_5873_9
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7345..8856
DNA (1512bp) protein (504aa)
Chaperone protein DnaK n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CIV8_MYXFH rbh
chaperone protein DnaK
Chaperone protein DnaK {ECO:0000313|EMBL:ERK92590.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
13_1_40cm_2_scaffold_5873_10
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8856..9860
DNA (1005bp) protein (335aa)
membrane dipeptidase (EC:3.4.13.19)
Membrane dipeptidase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LSQ3_HALO1
peptidase Tax=RBG_13_Deltaproteobacteria_61_14_curated
13_1_40cm_2_scaffold_5873_11
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9857..10813)
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKK8_ANADE
hypothetical protein; K07027 Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_2_scaffold_5873_12
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10830..11996)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UEH4_ANASK
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_40cm_2_scaffold_5873_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12250..12687
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Bacillus subtilis RepID=P94570_BACIU
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
13_1_40cm_2_scaffold_5873_14
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

13809..14498
DNA (690bp) protein (230aa)
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RBG_16_Aminicenantes_66_30_curated
tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZTL2_DESOH
13_1_40cm_2_scaffold_5873_15
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14516..15337)
DNA (822bp) protein (274aa)
GMP synthase [glutamine-hydrolyzing] protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2UBM1_9DELT rbh
GMP synthase [glutamine-hydrolyzing] protein {ECO:0000313|EMBL:ERK92563.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococ
hypothetical protein
13_1_40cm_2_scaffold_5873_16
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15444..16106
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MNR2_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE06797.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
13_1_40cm_2_scaffold_5873_17
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16109..16873)
DNA (765bp) protein (255aa)
Adenylyl-sulfate kinase {ECO:0000256|RuleBase:RU004347, ECO:0000256|SAAS:SAAS00249903}; EC=2.7.1.25 {ECO:0000256|RuleBase:RU004347, ECO:0000256|SAAS:SAAS00249903};; TaxID=1406225 species="Bacteria; Pr
Adenylyl-sulfate kinase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P444_9DELT
adenylylsulfate kinase
13_1_40cm_2_scaffold_5873_18
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(16972..17436)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IF99_ANADE
Mov34/MPN/PAD-1 family protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
hypothetical protein
13_1_40cm_2_scaffold_5873_19
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17433..17939)
DNA (507bp) protein (169aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE4_ANADF
pyridoxal-5'-phosphate-dependent protein beta subunit
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:ABS27790.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterin
13_1_40cm_2_scaffold_5873_20
unknown

Not on your lists

comp(18262..18591)
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_40cm_2_scaffold_5873_21
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(18585..18866)
DNA (282bp) protein (94aa)
MoaD family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8USB7_9AQUI
MoaD family protein {ECO:0000313|EMBL:EDP76072.1}; TaxID=392423 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
MoaD family protein
13_1_40cm_2_scaffold_5873_22
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18857..19528)
DNA (672bp) protein (224aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCN1_ANADF
UBA/THIF-type NAD/FAD binding protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
UBA/THIF-type NAD/FAD binding protein
13_1_40cm_2_scaffold_5873_23
unknown

Not on your lists

comp(19525..20166)
DNA (642bp) protein (214aa)

This feature has no annotations

13_1_40cm_2_scaffold_5873_24
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20204..20467
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S9P4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AKF81466.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
hypothetical protein
13_1_40cm_2_scaffold_5873_25
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20680..21135
DNA (456bp) protein (152aa)
Sensor histidine kinase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FX67_STIAD
Sensor protein degS {ECO:0000313|EMBL:KFE70690.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangi
sensor histidine kinase
13_1_40cm_2_scaffold_5873_26
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21138..21716
DNA (579bp) protein (193aa)
Sensor protein DegS {ECO:0000313|EMBL:EAU65767.1}; EC=2.7.3.- {ECO:0000313|EMBL:EAU65767.1};; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cysto
Sensor histidine kinase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FX67_STIAD
sensor histidine kinase
13_1_40cm_2_scaffold_5873_27
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21713..22402
DNA (690bp) protein (230aa)
DNA-binding response regulator, LuxR family n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U3K9_9DELT
DNA-binding response regulator, LuxR family {ECO:0000313|EMBL:ERK92554.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococc
LuxR family transcriptional regulator
13_1_40cm_2_scaffold_5873_28
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(22469..23161)
DNA (693bp) protein (231aa)
carbohydrate kinase-like protein (EC:2.7.1.-)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=1245629 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
13_1_40cm_2_scaffold_5873_29
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23244..23672
DNA (429bp) protein (143aa)
Protein translocase subunit secG n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2II23_ANADE
protein translocase subunit secG; K03075 preprotein translocase subunit SecG Tax=RBG_16_Anaeromyxobacter_69_14_curated
protein translocase subunit secG
13_1_40cm_2_scaffold_5873_trna_1
unknown

Not on your lists

23719..23800
DNA (82bp)
transferRNA
Displaying items 1-30 of 31 in total

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