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13_1_40cm_2_scaffold_6118

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_6118_1
unknown

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1..105
DNA (105bp) protein (35aa)

This feature has no annotations

13_1_40cm_2_scaffold_6118_2
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

146..604
DNA (459bp) protein (153aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQL4_MYXFH
ribosomal-protein-alanine acetyltransferase
13_1_40cm_2_scaffold_6118_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(634..1257)
DNA (624bp) protein (208aa)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BHU4_MEISD
phosphoribosyl-ATP diphosphatase
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas meth
13_1_40cm_2_scaffold_6118_4
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1254..2006)
DNA (753bp) protein (251aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
imidazole glycerol phosphate synthase subunit HisF (EC:5.3.1.16)
HisF-LUCA n=1 Tax=synthetic construct RepID=UPI0003C0DDA4
13_1_40cm_2_scaffold_6118_5
Saccharibacter sp. AM169, Saccharibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2000..2743)
DNA (744bp) protein (248aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|RuleBase:RU003658, ECO:0000256|SAAS:SAAS00015841}; EC=5.3.1.16 {ECO:0000256|RuleBase:RU0
hypothetical protein n=1 Tax=Saccharibacter floricola RepID=UPI00035C4F8F
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
13_1_40cm_2_scaffold_6118_6
Beauveria bassiana, Beauveria, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

comp(2740..3873)
DNA (1134bp) protein (378aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|RuleBase:RU000598}; EC=4.2.1.19 {ECO:0000256|RuleBase:RU000598};; TaxID=1245745 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sor
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=uncultured bacterium RepID=K2B6I5_9BACT
13_1_40cm_2_scaffold_6118_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3870..4727)
DNA (858bp) protein (286aa)
HAD-superfamily hydrolase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M796_9EURY
HAD-superfamily hydrolase {ECO:0000313|EMBL:EMA41571.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 1
13_1_40cm_2_scaffold_6118_8
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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comp(4724..5800)
DNA (1077bp) protein (359aa)
hisC; histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RBG_16_Aminicenantes_63_16_curated
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFI7_CHLTF
13_1_40cm_2_scaffold_6118_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5797..7077)
DNA (1281bp) protein (427aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
histidinol dehydrogenase n=1 Tax=Synechococcus sp. CB0205 RepID=UPI0002001606
histidinol dehydrogenase
13_1_40cm_2_scaffold_6118_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7074..7685)
DNA (612bp) protein (204aa)
ATP phosphoribosyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIQ6_CHLTF
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; E
ATP phosphoribosyltransferase catalytic subunit
13_1_40cm_2_scaffold_6118_11
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(7679..8626)
DNA (948bp) protein (316aa)
hisZ; ATP phosphoribosyltransferase regulatory subunit (EC:6.1.1.21)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=HISZ_GEODF
hisS; histidyl-tRNA synthetase; K02502 ATP phosphoribosyltransferase regulatory subunit Tax=CG_Anaero_02
13_1_40cm_2_scaffold_6118_12
Deinococcus sp. RL, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

8656..9789
DNA (1134bp) protein (378aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
dihydroorotate dehydrogenase n=1 Tax=Deinococcus sp. 2009 RepID=UPI0003B42A18
pyrD; dihydroorotate dehydrogenase 2
13_1_40cm_2_scaffold_6118_13
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9796..11334)
DNA (1539bp) protein (513aa)
lytic transglycosylase, SLT, LysM and LysM domain-containing; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
Lytic transglycosylase catalytic n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MD11_RHOM4
Lytic transglycosylase catalytic
13_1_40cm_2_scaffold_6118_14
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11386..12342)
DNA (957bp) protein (319aa)
PAP2 family protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
PAP2 family protein id=3283446 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
PAP2 family protein
13_1_40cm_2_scaffold_6118_15
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12343..14829)
DNA (2487bp) protein (829aa)
Membrane protein, inferred for ABFAE pathway {ECO:0000313|EMBL:KFE71328.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyala
Exporters of the RND superfamily id=3383816 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! rbh
RND efflux transporter
13_1_40cm_2_scaffold_6118_16
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14839..16182)
DNA (1344bp) protein (448aa)
aminotransferase (EC:2.6.1.-) Tax=RBG_16_Anaeromyxobacter_69_14_curated
aminotransferase (EC:2.6.1.-) id=14625640 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
aminotransferase (EC:2.6.1.-)
13_1_40cm_2_scaffold_6118_17
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16280..18598)
DNA (2319bp) protein (773aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U0S7_MYXSD
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:AGC41818.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" so
13_1_40cm_2_scaffold_6118_18
unknown

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comp(18729..19385)
DNA (657bp) protein (219aa)

This feature has no annotations

13_1_40cm_2_scaffold_6118_19
unknown

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19618..19932
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_2_scaffold_6118_20
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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20462..20785
DNA (324bp) protein (108aa)
Membrane-bound lytic murein transglycosylase D n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q3D6_9DELT
Lytic transglycosylase {ECO:0000313|EMBL:KFA93212.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cys
Lytic transglycosylase
13_1_40cm_2_scaffold_6118_21
unknown

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20826..21644
DNA (819bp) protein (273aa)

This feature has no annotations

13_1_40cm_2_scaffold_6118_22
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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21641..23515
DNA (1875bp) protein (625aa)
Uncharacterized protein n=1 Tax=Guillardia theta CCMP2712 RepID=L1IEH2_GUITH
Serine/threonine protein kinase {ECO:0000313|EMBL:AKF05615.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source=
FHA domain-containing protein
13_1_40cm_2_scaffold_6118_23
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

23531..24655
DNA (1125bp) protein (375aa)
Peptidase M61 domain protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNU4_ROSCS
peptidase M61 domain-containing protein
Peptidase M61 domain protein {ECO:0000313|EMBL:ABU59238.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexu
Displaying 23 items

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