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13_1_40cm_2_scaffold_1186

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1186_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1..300
DNA (300bp) protein (100aa)
ureE; Urease accessory protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Urease accessory protein ureE id=2317449 bin=GWA2_Methylomirabilis_73_35 species=Deinococcus gobiensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ureE; urease accessory protein UreE
13_1_40cm_2_scaffold_1186_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

293..976
DNA (684bp) protein (228aa)
Urease accessory protein UreF id=2317448 bin=GWA2_Methylomirabilis_73_35 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Urease accessory protein UreF; K03188 urease accessory protein Tax=GWA2_Rokubacteria_73_35_curated
Urease accessory protein UreF
13_1_40cm_2_scaffold_1186_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

973..1584
DNA (612bp) protein (204aa)
Urease accessory protein UreG id=2317447 bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ureG; urease accessory protein UreG; K03189 urease accessory protein Tax=GWA2_Rokubacteria_73_35_curated
ureG; urease accessory protein UreG
13_1_40cm_2_scaffold_1186_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1581..2402
DNA (822bp) protein (274aa)
ureD; urease accessory protein ureD; K03190 urease accessory protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Urease accessory protein UreD id=2317446 bin=GWA2_Methylomirabilis_73_35 species=Gordonia neofelifaecis genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ureD; urease accessory protein ureD
13_1_40cm_2_scaffold_1186_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2464..3081
DNA (618bp) protein (206aa)
Putative phosphate transport regulator id=2317445 bin=GWA2_Methylomirabilis_73_35 species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphate transport regulator; K07220 hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
phosphate transport regulator
13_1_40cm_2_scaffold_1186_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3083..4075
DNA (993bp) protein (331aa)
phosphate/sulphate permease; K03306 inorganic phosphate transporter, PiT family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Phosphate/sulphate permease id=2317444 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphate/sulphate permease
13_1_40cm_2_scaffold_1186_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4110..4796
DNA (687bp) protein (229aa)
phoB; response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Response regulator in two-component regulatory system with PhoR (Or CreC), regulation of Pi uptake (OmpR family) id=2589155 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phoB; response regulator in two-component regulatory system with PhoR (or CreC), regulation of Pi uptake (OmpR family)
13_1_40cm_2_scaffold_1186_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4796..6610
DNA (1815bp) protein (605aa)
Sensor protein yycG (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Sensor protein yycG (EC:2.7.13.3) id=14625803 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Sensor protein yycG (EC:2.7.13.3)
13_1_40cm_2_scaffold_1186_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

6650..7063
DNA (414bp) protein (138aa)
acT domain-containing protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ACT domain-containing protein id=4139003 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acT domain-containing protein
13_1_40cm_2_scaffold_1186_10
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7060..8022)
DNA (963bp) protein (321aa)
periplasmic serine protease (EC:3.4.21.-)
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LNK0_METBM
hypothetical protein Tax=RBG_16_Gamma2_65_34_curated
13_1_40cm_2_scaffold_1186_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8019..8375)
DNA (357bp) protein (119aa)
hypothetical protein id=3398315 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_1186_12

Not on your lists

8567..9610
DNA (1044bp) protein (348aa)
Alpha/beta hydrolase fold protein n=1 Tax=Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) RepID=C7M6J0_CAPOD
Uncharacterized protein {ECO:0000313|EMBL:KKN73307.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
alpha/beta hydrolase fold protein
13_1_40cm_2_scaffold_1186_13

Not on your lists

9607..10974
DNA (1368bp) protein (456aa)
gh3 auxin-responsive promoter n=1 Tax=Rudanella lutea RepID=UPI0003819F15
Uncharacterized protein {ECO:0000313|EMBL:KKN73308.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GH3 auxin-responsive promoter
13_1_40cm_2_scaffold_1186_14
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

10971..11468
DNA (498bp) protein (166aa)
DinB family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZZ0_CALAS
DinB family protein Tax=RBG_16_Chloroflexi_57_9_curated
DinB family protein
13_1_40cm_2_scaffold_1186_15
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11933..12133
DNA (201bp) protein (67aa)
beta-lactamase n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI00030DC87E
Beta-lactamase {ECO:0000313|EMBL:KAK47758.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.
beta-lactamase
13_1_40cm_2_scaffold_1186_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12166..12561)
DNA (396bp) protein (132aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAA
Methylglyoxal synthase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG34_RHOM4
methylglyoxal synthase
13_1_40cm_2_scaffold_1186_17
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12813..14096
DNA (1284bp) protein (428aa)
Alkaline phosphatase n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AAU8_COLFT
alkaline phosphatase
Alkaline phosphatase {ECO:0000313|EMBL:AJW44811.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytic
Displaying 17 items

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