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13_1_40cm_2_scaffold_13568

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_13568_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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233..700
DNA (468bp) protein (156aa)
Isoquinoline 1-oxidoreductase; K07302 isoquinoline 1-oxidoreductase, alpha subunit [EC:1.3.99.16] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003829CAF
[2Fe-2S]-binding domain-containing protein
13_1_40cm_2_scaffold_13568_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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697..2841
DNA (2145bp) protein (715aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN80_SINAD id=5224646 bin=16ft_combo_ws3_JS1 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
13_1_40cm_2_scaffold_13568_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2887..3546)
DNA (660bp) protein (220aa)
Putative uncharacterized protein id=2338868 bin=GWA2_Methylomirabilis_73_35 species=Campylobacter coli genus=Campylobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Putative uncharacterized protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_13568_4
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3679..4134)
DNA (456bp) protein (152aa)
Methyltransferase type 11 n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PUF1_KRIFD
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADB29469.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836
13_1_40cm_2_scaffold_13568_5
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4082..4426)
DNA (345bp) protein (115aa)
Methyltransferase type 11 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVH2_PARL1
Conserved protein {ECO:0000313|EMBL:GAK45870.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
hypothetical protein
13_1_40cm_2_scaffold_13568_6
unknown

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comp(4538..5260)
DNA (723bp) protein (241aa)

This feature has no annotations

13_1_40cm_2_scaffold_13568_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(5257..5961)
DNA (705bp) protein (235aa)
livF; high-affinity branched-chain amino acid ABC transporter (ATP-binding protein) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein id=14625342 bin=bin7_NC10_sister species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
amino acid ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_13568_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(5948..6673)
DNA (726bp) protein (242aa)
ABC transporter-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ABC transporter ATP-binding protein id=14625344 bin=bin7_NC10_sister species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter-like protein
13_1_40cm_2_scaffold_13568_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(6660..7652)
DNA (993bp) protein (331aa)
putative ABC transporter permiase component id=14626607 bin=bin7_NC10_sister species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
putative ABC transporter permiase component Tax=CSP1_6_Rokubacteria
putative ABC transporter permiase component
13_1_40cm_2_scaffold_13568_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(7652..8566)
DNA (915bp) protein (305aa)
putative Branched-chain amino acid ABC transporter (permease protein); livH-like protein id=14626606 bin=bin7_NC10_sister species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative Branched-chain amino acid ABC transporter (permease protein); livH-like protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_2_scaffold_13568_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(8530..8649)
DNA (120bp) protein (40aa)
Putative Leu/Ile/Val-binding protein homolog 8 id=3646888 bin=GWF2_Methylomirabilis_70_14 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative Leu/Ile/Val-binding protein homolog 8 Tax=GWA2_Rokubacteria_70_23_curated
Displaying 11 items

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