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13_1_40cm_2_scaffold_16021

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_16021_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3..680)
DNA (678bp) protein (226aa)
MFS transporter xanthine/uracil permease; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
MFS transporter xanthine/uracil permease id=2720738 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
MFS transporter xanthine/uracil permease
13_1_40cm_2_scaffold_16021_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(628..933)
DNA (306bp) protein (102aa)
id=4810598 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
id=4810598 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_16021_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(1040..3334)
DNA (2295bp) protein (765aa)
ribonucleotide-diphosphate reductase subunit alpha; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase id=4810597 bin=GWC2_Methylomirabilis_70_16 species=RAAC19 genus=RAAC19 taxon_order=RAAC19 taxon_class=RAAC19 phylum=OP11 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_2_scaffold_16021_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3674..4888
DNA (1215bp) protein (405aa)
Type I secretion outer membrane protein id=2720743 bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
type I secretion outer membrane protein Tax=GWA2_Rokubacteria_73_35_curated
type I secretion outer membrane protein
13_1_40cm_2_scaffold_16021_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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4925..6529
DNA (1605bp) protein (535aa)
putative Efflux transporter, RND family, MFP subunit; K02005 HlyD family secretion protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative Efflux transporter, RND family, MFP subunit id=2720744 bin=GWA2_Methylomirabilis_73_35 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RND family efflux transporter MFP subunit
13_1_40cm_2_scaffold_16021_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6532..7281
DNA (750bp) protein (250aa)
ABC transporter ATP-binding protein; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative transporter subunit: ATP-binding component of ABC superfamily id=2720745 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
13_1_40cm_2_scaffold_16021_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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7278..8510
DNA (1233bp) protein (411aa)
Export ABC transporter permease id=2720746 bin=GWA2_Methylomirabilis_73_35 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
export ABC transporter permease
13_1_40cm_2_scaffold_16021_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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8561..9001
DNA (441bp) protein (147aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein id=2720971 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Displaying 8 items

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