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13_1_40cm_2_scaffold_2744

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2744_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

59..1087
DNA (1029bp) protein (343aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
2-oxoglutarate ferredoxin oxidoreductase subunit beta id=4115287 bin=GWA2_Methylomirabilis_73_35 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thiamine pyrophosphate domain-containing TPP-binding protein
13_1_40cm_2_scaffold_2744_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1222..2667
DNA (1446bp) protein (482aa)
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
glcD; glycolate oxidase subunit GlcD (EC:1.1.3.15)
Glycolate oxidase, subunit GlcD id=4115288 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_2744_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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2667..3980
DNA (1314bp) protein (438aa)
FAD linked oxidase-like protein id=4115289 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
FAD linked oxidase-like protein Tax=GWA2_Rokubacteria_73_35_curated
FAD linked oxidase-like protein
13_1_40cm_2_scaffold_2744_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3980..5227
DNA (1248bp) protein (416aa)
Uncharacterized protein id=4115290 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_40cm_2_scaffold_2744_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

5399..5722
DNA (324bp) protein (108aa)
cupin domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Cupin domain protein id=4143459 bin=GWF2_Methylomirabilis_70_14 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cupin 2 barrel domain-containing protein
13_1_40cm_2_scaffold_2744_6
unknown

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5722..5847
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_2_scaffold_2744_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5840..6241
DNA (402bp) protein (134aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4115295 bin=GWA2_Methylomirabilis_73_35 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_2744_8
unknown

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comp(6156..6611)
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_40cm_2_scaffold_2744_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6987..7922
DNA (936bp) protein (312aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Thioredoxin reductase id=4115297 bin=GWA2_Methylomirabilis_73_35 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thioredoxin reductase
13_1_40cm_2_scaffold_2744_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8172..8603
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8X5_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hypothetical protein
13_1_40cm_2_scaffold_2744_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8690..9991)
DNA (1302bp) protein (434aa)
putative L-aspartate dehydrogenase; K06989 aspartate dehydrogenase [EC:1.4.1.21] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Probable L-aspartate dehydrogenase id=4115298 bin=GWA2_Methylomirabilis_73_35 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative L-aspartate dehydrogenase
13_1_40cm_2_scaffold_2744_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10404..11792
DNA (1389bp) protein (463aa)
hypothetical protein; K09760 DNA recombination protein RmuC Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Conserved uncharacterized protein id=4115300 bin=GWA2_Methylomirabilis_73_35 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RmuC-domain-containing protein
13_1_40cm_2_scaffold_2744_13
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11799..13700)
DNA (1902bp) protein (634aa)
Glr3452 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NFS2_GLOVI
hypothetical protein Tax=RBG_16_Deltaproteobacteria_71_12_curated
hypothetical protein
13_1_40cm_2_scaffold_2744_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13741..13971
DNA (231bp) protein (77aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4555259 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_2744_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13940..15181
DNA (1242bp) protein (414aa)
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase id=4555257 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
13_1_40cm_2_scaffold_2744_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15181..16320
DNA (1140bp) protein (380aa)
dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative uncharacterized protein id=4961237 bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dioxygenase
Displaying 16 items

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