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13_1_40cm_2_scaffold_3031

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3031_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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1..1083
DNA (1083bp) protein (361aa)
id=14627849 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
13_1_40cm_2_scaffold_3031_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1083..1991
DNA (909bp) protein (303aa)
transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] Tax=GWA2_Rokubacteria_73_35_curated
Transketolase subunit A id=4969030 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transketolase
13_1_40cm_2_scaffold_3031_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1957..2883
DNA (927bp) protein (309aa)
transketolase central region; K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
transketolase; K00615 transketolase [EC:2.2.1.1] id=14627851 bin=bin7_NC10_sister species=Anaeromusa acidaminophila genus=Anaeromusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
transketolase, central region
13_1_40cm_2_scaffold_3031_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(2909..3649)
DNA (741bp) protein (247aa)
High-affinity nickel-transporter id=2419356 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=CSP1_6_Rokubacteria
hypothetical protein
13_1_40cm_2_scaffold_3031_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3662..4456)
DNA (795bp) protein (265aa)
ABC transporter; K09686 antibiotic transport system permease protein Tax=GWA2_Rokubacteria_73_35_curated
ABC transporter; K09686 antibiotic transport system permease protein id=14632626 bin=bin9_gal15 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
ABC transporter
13_1_40cm_2_scaffold_3031_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4440..5399)
DNA (960bp) protein (320aa)
polyamine-transporting ATPase (EC:3.6.3.31); K09687 antibiotic transport system ATP-binding protein Tax=GWA2_Rokubacteria_73_35_curated
polyamine-transporting ATPase (EC:3.6.3.31)
Polyamine-transporting ATPase id=2419362 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_3031_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5500..5748
DNA (249bp) protein (83aa)
Rieske (2Fe-2S) domain-containing protein Tax=GWA2_Rokubacteria_70_23_curated
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase id=4887996 bin=GWC2_Methylomirabilis_70_24 species=Herbaspirillum sp. YR522 genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
2Fe-2S ferredoxin
13_1_40cm_2_scaffold_3031_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5745..6152
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PC53_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_40cm_2_scaffold_3031_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6156..6899)
DNA (744bp) protein (248aa)
glycosyl transferase family protein Tax=GWA2_Rokubacteria_73_35_curated
glycosyl transferase id=2419366 bin=GWA2_Methylomirabilis_73_35 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycosyl transferase family protein
13_1_40cm_2_scaffold_3031_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6922..8649)
DNA (1728bp) protein (576aa)
glycosyl transferase family protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Glycosyl transferase family 39 id=2419453 bin=GWA2_Methylomirabilis_73_35 species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4-amino-4-deoxy-L-arabinose transferase
13_1_40cm_2_scaffold_3031_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8656..9384)
DNA (729bp) protein (243aa)
Molybdopterin binding domain protein id=2419455 bin=GWA2_Methylomirabilis_73_35 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
molybdopterin binding domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
molybdopterin binding domain-containing protein
13_1_40cm_2_scaffold_3031_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9427..9996
DNA (570bp) protein (190aa)
short-chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Short-chain dehydrogenase/reductase SDR id=2419457 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
short-chain dehydrogenase
13_1_40cm_2_scaffold_3031_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9945..10190
DNA (246bp) protein (82aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJH9_9BACT
short-chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
short-chain dehydrogenase
13_1_40cm_2_scaffold_3031_14
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10195..11082
DNA (888bp) protein (296aa)
Undecaprenyl-diphosphatase {ECO:0000255|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000255|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000255|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphat
Undecaprenyl-diphosphatase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=UPPP_KORVE
UDP-diphosphatase
13_1_40cm_2_scaffold_3031_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11112..13463)
DNA (2352bp) protein (784aa)
Histidine kinase (EC:2.7.13.3) Tax=GWA2_Rokubacteria_70_23_curated
Putative Histidine kinase id=3684125 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multi-sensor hybrid histidine kinase
13_1_40cm_2_scaffold_3031_16
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13460..15019)
DNA (1560bp) protein (520aa)
Histidine kinase {ECO:0000313|EMBL:ABS27974.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABS27974.1};; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaerom
Histidine kinase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGX8_ANADF
histidine kinase
13_1_40cm_2_scaffold_3031_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(15113..16393)
DNA (1281bp) protein (427aa)
Secretion protein HlyD family protein id=4748858 bin=GWC2_Methylomirabilis_70_16 species=Microcoleus sp. PCC 7113 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multidrug resistance efflux pump Tax=GWC2_Rokubacteria_70_16_curated
multidrug resistance efflux pump
13_1_40cm_2_scaffold_3031_18
unknown

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16620..16955
DNA (336bp) protein (112aa)

This feature has no annotations

Displaying 18 items

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