ggKbase home page

13_1_40cm_2_scaffold_4327

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_4327_1
unknown

Not on your lists

comp(3..194)
DNA (192bp) protein (64aa)

This feature has no annotations

13_1_40cm_2_scaffold_4327_2
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(191..751)
DNA (561bp) protein (187aa)
Appr-1-p processing domain protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CMT6_DESK7
Appr-1-p processing domain-containing protein
Appr-1-p processing domain-containing protein Tax=CG_Delta_01
13_1_40cm_2_scaffold_4327_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

810..2090
DNA (1281bp) protein (427aa)
histidinol dehydrogenase (EC:1.1.1.23); K15509 sulfopropanediol 3-dehydrogenase [EC:1.1.1.308] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
histidinol dehydrogenase (EC:1.1.1.23)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DD9F7C
13_1_40cm_2_scaffold_4327_4
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

2127..2651
DNA (525bp) protein (175aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein id=14430347 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_4327_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2804..3112
DNA (309bp) protein (103aa)
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNP-1 like RNA-binding protein id=1884756 bin=GWA2_Methylomirabilis_73_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNP-1 like RNA-binding protein
13_1_40cm_2_scaffold_4327_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3119..3334
DNA (216bp) protein (72aa)
id=3327194 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
id=3327194 Tax=GWA2_Rokubacteria_70_23_curated
13_1_40cm_2_scaffold_4327_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3360..4223)
DNA (864bp) protein (288aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
Uncharacterized protein id=2119285 bin=GWD2_Deltaproteobacteria_55_8 species=Haloferax elongans genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
13_1_40cm_2_scaffold_4327_8
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4227..4517)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00037B8725
hypothetical protein Tax=RBG_16_Betaproteobacteria_66_20_curated
hypothetical protein
13_1_40cm_2_scaffold_4327_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4526..5290)
DNA (765bp) protein (255aa)
Baf family transcriptional acitvator (EC:2.7.1.33); K03525 type III pantothenate kinase [EC:2.7.1.33] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Type III pantothenate kinase id=4208293 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transcriptional activator, Baf family
13_1_40cm_2_scaffold_4327_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5332..6147)
DNA (816bp) protein (272aa)
Heat shock protein DnaJ domain protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Heat shock protein DnaJ domain protein id=4856215 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Heat shock protein DnaJ domain protein
13_1_40cm_2_scaffold_4327_11
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6150..6977)
DNA (828bp) protein (276aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZAD3_AZOL4
putative metallophosphodiesterase
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase
13_1_40cm_2_scaffold_4327_12
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6981..7253)
DNA (273bp) protein (91aa)
Spermidine/putrescine transport system ATP-binding protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P0Y6_AZOS1
potA; spermidine/putrescine transport system ATP-binding protein; K02052 putative spermidine/putrescine transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
iron ABC transporter substrate-binding protein
13_1_40cm_2_scaffold_4327_13
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7385..7663
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09AM4_STIAD
Uncharacterized protein {ECO:0000313|EMBL:EAU68781.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Sti
13_1_40cm_2_scaffold_4327_14
unknown

Not on your lists

7797..8015
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_2_scaffold_4327_15

Not on your lists

comp(7972..8253)
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW30321.1}; TaxID=1618935 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_52_8c.;"
Displaying 15 items

View Taxonomy