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13_1_40cm_2_scaffold_4888

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_4888_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3..677)
DNA (675bp) protein (225aa)
peptidase M48, Ste24p Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptidase M48, Ste24p id=4599610 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase M48, Ste24p
13_1_40cm_2_scaffold_4888_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(699..1232)
DNA (534bp) protein (178aa)
hypothetical protein id=4775186 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_40cm_2_scaffold_4888_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1339..1992)
DNA (654bp) protein (218aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Amidase id=4599606 bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidase
13_1_40cm_2_scaffold_4888_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2715..3491)
DNA (777bp) protein (259aa)
peptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Peptide ABC transporter permease protein id=4775215 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter permease
13_1_40cm_2_scaffold_4888_5
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3781..4680)
DNA (900bp) protein (300aa)
peptide ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Peptide ABC transporter permease protein id=4775216 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter permease
13_1_40cm_2_scaffold_4888_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4800..6410)
DNA (1611bp) protein (537aa)
ABC transporter peptide-binding protein id=3884414 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein Tax=GWA2_Rokubacteria_70_23_curated
ABC transporter peptide-binding protein
13_1_40cm_2_scaffold_4888_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6503..7756)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Mycobacterium phlei RIVM601174 RepID=I0RY57_MYCPH
hypothetical membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical membrane protein
13_1_40cm_2_scaffold_4888_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7762..8343)
DNA (582bp) protein (194aa)
esterase, PHB depolymerase family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Esterase, PHB depolymerase family id=3986302 bin=GWA2_Methylomirabilis_73_35 species=Methylobacterium populi genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
polyhydroxyalkanoic acid depolymerase
13_1_40cm_2_scaffold_4888_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8647..8961)
DNA (315bp) protein (105aa)
adenine deaminase; K01486 adenine deaminase [EC:3.5.4.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
adenine deaminase (EC:3.5.4.2)
Adenine deaminase id=3986303 bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_4888_10
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8946..10322)
DNA (1377bp) protein (459aa)
adenine deaminase; K01486 adenine deaminase [EC:3.5.4.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Adenine deaminase id=3112746 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
adenine deaminase
13_1_40cm_2_scaffold_4888_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10340..10777
DNA (438bp) protein (146aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Peptide chain release factor id=3665312 bin=GWC2_Methylomirabilis_70_16 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptide chain release factor
13_1_40cm_2_scaffold_4888_12
Legionella massiliensis, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10790..11224
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0003705118
Scytalone dehydratase {ECO:0000313|EMBL:CDZ77372.1}; TaxID=1034943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella massiliensis.
13_1_40cm_2_scaffold_4888_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(11246..14719)
DNA (3474bp) protein (1158aa)
indolepyruvate ferredoxin oxidoreductase; K04090 indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] Tax=GWA2_Rokubacteria_73_35_curated
Indolepyruvate ferredoxin oxidoreductase id=3610279 bin=GWC2_Methylomirabilis_70_24 species=Streptosporangium roseum genus=Streptosporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
2-oxoacid ferredoxin oxidoreductase
13_1_40cm_2_scaffold_4888_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

14776..15723
DNA (948bp) protein (316aa)
luciferase-like monooxygenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative oxidoreductase id=4290028 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative oxidoreductase
13_1_40cm_2_scaffold_4888_15
unknown

Not on your lists

comp(15748..15891)
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 15 items

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