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13_1_40cm_2_scaffold_5337

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_5337_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1..888
DNA (888bp) protein (296aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
isobutyryl-CoA mutase (EC:5.4.99.13)
Methylmalonyl-CoA mutase, large subunit id=3618738 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_5337_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1220..2287
DNA (1068bp) protein (356aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid transaminase id=3618743 bin=GWF2_Methylomirabilis_70_14 species=Acetobacteraceae bacterium AT-5844 genus=unknown taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_5337_3
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2291..2803
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67JY9_SYMTH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD42011.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium th
13_1_40cm_2_scaffold_5337_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2800..3225
DNA (426bp) protein (142aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Histidine triad (HIT) protein id=2475799 bin=GWC2_Methylomirabilis_70_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
13_1_40cm_2_scaffold_5337_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3230..3643
DNA (414bp) protein (138aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
B12-binding protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] id=14626086 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
(R)-methylmalonyl-CoA mutase, adenosylcobamide-binding subunit
13_1_40cm_2_scaffold_5337_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3677..4822
DNA (1146bp) protein (382aa)
ivd; isovaleryl-CoA dehydrogenase (EC:1.3.99.10) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
ivd; isovaleryl-CoA dehydrogenase (EC:1.3.99.10)
Isovaleryl-CoA dehydrogenase id=4743715 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_2_scaffold_5337_7
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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4881..5663
DNA (783bp) protein (261aa)
sulfonate ABC transporter ATP-binding lipoprotein n=1 Tax=Methylobacterium sp. MB200 RepID=UPI00034499F3
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
ABC transporter-like protein
13_1_40cm_2_scaffold_5337_8
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5660..6406
DNA (747bp) protein (249aa)
ABC transporter, permease protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZVJ6_9PROT
ABC transporter, permease protein {ECO:0000313|EMBL:EHM02959.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae
binding-protein-dependent transport system inner membrane protein
13_1_40cm_2_scaffold_5337_9
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6403..7152
DNA (750bp) protein (250aa)
Nitrate ABC transporter permease n=1 Tax=Advenella kashmirensis W13003 RepID=V8QU92_9BURK
Nitrate ABC transporter permease {ECO:0000313|EMBL:ETF02923.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W
binding-protein-dependent transporters inner membrane component
13_1_40cm_2_scaffold_5337_10
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7161..7808
DNA (648bp) protein (216aa)
Phosphorylated carbohydrates phosphatase {ECO:0000313|EMBL:AGC67377.1}; EC=3.1.3.- {ECO:0000313|EMBL:AGC67377.1};; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcace
Haloacid dehalogenase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VKV1_CLOSH
haloacid dehalogenase
13_1_40cm_2_scaffold_5337_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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7845..8540
DNA (696bp) protein (232aa)
rpiA; ribose 5-phosphate isomerase (Phosphoriboisomerase A) (PRI) (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {E
Ribose-5-phosphate isomerase A n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHI2_9BACT
13_1_40cm_2_scaffold_5337_12
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8543..10612
DNA (2070bp) protein (690aa)
transketolase n=1 Tax=Bordetella sp. FB-8 RepID=UPI000376FAF9
Transketolase {ECO:0000313|EMBL:AKF07903.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amyl
transketolase
13_1_40cm_2_scaffold_5337_13
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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10609..11352
DNA (744bp) protein (248aa)
Glycogen operon protein glgX-2 id=4199503 bin=GWC2_Methylomirabilis_70_16 species=Rhodopirellula sp. SWK7 genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Glycogen operon protein glgX-2 {ECO:0000313|EMBL:EDL57977.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM
glycoside hydrolase family 13
Displaying 13 items

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