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13_1_40cm_2_scaffold_8376

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_8376_1
unknown

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1..165
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_40cm_2_scaffold_8376_2
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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comp(309..524)
DNA (216bp) protein (72aa)
Type III secretion fhipep protein, putative n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L5D5_THERP
type III secretion fhipep protein, putative
Type III secretion fhipep protein, putative {ECO:0000313|EMBL:ACM06866.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobiu
13_1_40cm_2_scaffold_8376_3
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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614..1303
DNA (690bp) protein (230aa)
cation diffusion facilitator family transporter n=1 Tax=Streptomyces sp. CNS615 RepID=UPI00037E215B
transport protein
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EGE44135.1}; TaxID=649189 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
13_1_40cm_2_scaffold_8376_4
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1311..1874)
DNA (564bp) protein (188aa)
transport-associated protein; K04065 hyperosmotically inducible periplasmic protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
13_1_40cm_2_scaffold_8376_5
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1991..2218)
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Anaeromyxobacter RepID=B4UFY7_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG72255.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_2_scaffold_8376_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2275..2781
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAR2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63097.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
13_1_40cm_2_scaffold_8376_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(2841..3404)
DNA (564bp) protein (188aa)
ccmG; periplasmic thioredoxin (cytochrome c biogenesis) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Periplasmic thioredoxin (Cytochrome c biogenesis) id=4062402 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ccmG; periplasmic thioredoxin (cytochrome c biogenesis)
13_1_40cm_2_scaffold_8376_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3401..5344)
DNA (1944bp) protein (648aa)
cycK; cytochrome c-type biogenesis protein cycK Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cycK; cytochrome c-type biogenesis protein cycK id=14625137 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
cycK; cytochrome c-type biogenesis protein cycK
13_1_40cm_2_scaffold_8376_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5341..5775)
DNA (435bp) protein (145aa)
ccmE; cytochrome c-type biogenesis protein CcmE Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
ccmE; cytochrome c-type biogenesis protein CcmE id=14625136 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ccmE; cytochrome c-type biogenesis protein CcmE
13_1_40cm_2_scaffold_8376_10
unknown

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comp(5772..6035)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_2_scaffold_8376_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(6035..6682)
DNA (648bp) protein (216aa)
Heme ABC transporter (Heme exporter protein C), permease protein (Cytochrome c biogenesis) id=4343481 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ccmC; heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis) Tax=GWA2_Rokubacteria_73_35_curated
ccmC; heme ABC transporter (heme exporter protein C), permease protein (cytochrome c biogenesis)
13_1_40cm_2_scaffold_8376_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6687..7364)
DNA (678bp) protein (226aa)
Cytochrome c-type biogenesis protein CcmB id=4343483 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Heme exporter, protein B Tax=GWA2_Rokubacteria_73_35_curated
Heme exporter, protein B
13_1_40cm_2_scaffold_8376_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7361..8098)
DNA (738bp) protein (246aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=4343485 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
heme exporter protein CcmA
13_1_40cm_2_scaffold_8376_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(8085..8852)
DNA (768bp) protein (256aa)
Cytochrome c oxidase caa3 assembly factor family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WW54_9SPHN
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
cytochrome c oxidase caa3-type, assembly factor CtaG-like protein
Displaying 14 items

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