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13_1_40cm_2_scaffold_9629

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_9629_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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1..759
DNA (759bp) protein (253aa)
amino acid/amide ABC transporter substrate-binding protein, HAAT family id=14625210 bin=bin7_NC10_sister species=Afipia sp. 1NLS2 genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=CSP1_6_Rokubacteria
branched chain amino acid family ABC transporter
13_1_40cm_2_scaffold_9629_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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761..1546
DNA (786bp) protein (262aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter related id=3772779 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter
13_1_40cm_2_scaffold_9629_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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1546..2253
DNA (708bp) protein (236aa)
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
ABC transporter related protein id=3368248 bin=GWA2_Methylomirabilis_73_35 species=Afipia sp. 1NLS2 genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
livF; branched-chain amino acid ABC transporter ATPase
13_1_40cm_2_scaffold_9629_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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2356..3216
DNA (861bp) protein (287aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=14625213 bin=bin7_NC10_sister species=Haloterrigena turkmenica genus=Haloterrigena taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=CSP1_6_Rokubacteria
amino acid/amide ABC transporter membrane protein 1, HAAT family
13_1_40cm_2_scaffold_9629_5
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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3221..4180
DNA (960bp) protein (320aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=14625214 bin=bin7_NC10_sister species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10 rbh
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=CSP1_6_Rokubacteria
branched-chain amino acid ABC-type transport system, permease component
13_1_40cm_2_scaffold_9629_6
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4193..5335)
DNA (1143bp) protein (381aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031D38B0
putative PAS/PAC sensor protein Tax=GWA2_Deltaproteobacteria_65_63_curated
histidine kinase
13_1_40cm_2_scaffold_9629_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(5319..7241)
DNA (1923bp) protein (641aa)
two component system sensor histidine kinase (EC:2.7.13.3)
integral membrane sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Two component system sensor histidine kinase id=2654076 bin=GWC2_Methylomirabilis_70_24 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_2_scaffold_9629_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(7238..8662)
DNA (1425bp) protein (475aa)
ABC-type dipeptide transport system, periplasmic component Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC-type dipeptide transport system, periplasmic component id=2654072 bin=GWC2_Methylomirabilis_70_24 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC-type dipeptide transport system, periplasmic component
13_1_40cm_2_scaffold_9629_9
unknown

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comp(8793..8918)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 9 items

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