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13_1_40cm_2_scaffold_11823

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_11823_1
unknown

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comp(3..98)
DNA (96bp) protein (32aa)

This feature has no annotations

13_1_40cm_2_scaffold_11823_2
RBG_16_Archaea_50_20_curated, Archaea

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comp(847..1086)
DNA (240bp) protein (80aa)
Deoxyribonuclease/rho motif-related TRAM n=1 Tax=Pyrobaculum calidifontis (strain JCM 11548 / VA1) RepID=A3MX71_PYRCJ
TRAM domain-containing protein Tax=RBG_16_Archaea_50_20_curated
putative RNA-binding protein, contains TRAM domain
13_1_40cm_2_scaffold_11823_3
RBG_16_Archaea_50_20_curated, Archaea

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1306..2034
DNA (729bp) protein (243aa)
F420-0:gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RBG_16_Archaea_50_20_curated
F420-0:gamma-glutamyl ligase (EC:6.3.2.-)
hypothetical protein n=1 Tax=unclassified candidate division pSL4 RepID=UPI0003763DF3
13_1_40cm_2_scaffold_11823_4
RBG_16_Archaea_50_20_curated, Archaea

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2136..3335
DNA (1200bp) protein (400aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00035E6C39
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
membrane-associated metalloprotease
13_1_40cm_2_scaffold_11823_5
RBG_16_Archaea_50_20_curated, Archaea

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3345..4292
DNA (948bp) protein (316aa)
Predicted ATPase (PP-loop superfamily) n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W864_UNCMA
n-type ATP pyrophosphatase superfamily protein Tax=RBG_16_Archaea_50_20_curated
ATPase
13_1_40cm_2_scaffold_11823_6
RBG_16_Zixibacteria_48_11_curated, Zixibacteria, Bacteria

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4324..4860
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Aeromonas media WS RepID=K2I8D5_AERME
hypothetical protein Tax=RBG_16_Zixibacteria_48_11_curated
hypothetical protein
13_1_40cm_2_scaffold_11823_7
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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4943..5548
DNA (606bp) protein (202aa)
psmB2; proteasome subunit beta (EC:3.4.25.1) Tax=RBG_16_Bathyarchaeota_48_13_curated
psmB1; proteasome, subunit beta (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8N0_9ARCH
13_1_40cm_2_scaffold_11823_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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5959..6213
DNA (255bp) protein (85aa)
Translin family protein; K07477 translin Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_2_scaffold_11823_9
Pyrobaculum islandicum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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6210..6854
DNA (645bp) protein (215aa)
deoxyribonuclease V (EC:3.1.21.7)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
Endonuclease V n=1 Tax=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) RepID=B1YC41_PYRNV
13_1_40cm_2_scaffold_11823_10
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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6851..7297
DNA (447bp) protein (149aa)
rfk; riboflavin kinase (EC:2.7.1.161) Tax=RBG_13_Bathyarchaeota_38_9_curated
Riboflavin kinase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AU96_9ARCH
hypothetical protein
13_1_40cm_2_scaffold_11823_11
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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7294..7467
DNA (174bp) protein (58aa)
Riboflavin kinase; Short=RFK;; EC=2.7.1.161;; CTP-dependent riboflavin kinase; CTP:riboflavin 5'-phosphotransferase; Flavokinase; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglo
13_1_40cm_2_scaffold_11823_12
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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comp(7445..7918)
DNA (474bp) protein (158aa)
taqD; glycerol-3-phosphate cytidylyltransferase (EC:2.7.7.39); K14656 FAD synthetase Tax=RBG_16_Bathyarchaeota_48_13_curated
FAD synthase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6SZH5_9EURY
glycerol-3-phosphate cytidylyltransferase
13_1_40cm_2_scaffold_11823_13
unknown

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8104..8415
DNA (312bp) protein (104aa)

This feature has no annotations

13_1_40cm_2_scaffold_11823_14
RBG_16_Archaea_50_20_curated, Archaea

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comp(8310..8933)
DNA (624bp) protein (208aa)
flap endonuclease-1; K04799 flap endonuclease-1 [EC:3.-.-.-] Tax=RBG_16_Archaea_50_20_curated
Flap endonuclease 1 n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEE0_PYRF1
flap structure-specific endonuclease
13_1_40cm_2_scaffold_11823_15
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(8946..9389)
DNA (444bp) protein (148aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L453_KORCO
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; K06898 Tax=RBG_13_Bathyarchaeota_38_9_curated
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
Displaying 15 items

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