ggKbase home page

13_1_40cm_2_scaffold_15447

Search features with annotation key words

Displaying 15 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_15447_1
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(2..460)
DNA (459bp) protein (153aa)
Polyadenylation specificity factor-like protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LMC0_THEBM
beta-lactamase; K07041 Tax=RBG_16_Archaea_50_20_curated
polyadenylation specificity factor-like protein
13_1_40cm_2_scaffold_15447_2
unknown

Not on your lists

528..1073
DNA (546bp) protein (182aa)

This feature has no annotations

13_1_40cm_2_scaffold_15447_3
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(1210..2100)
DNA (891bp) protein (297aa)
FKBP-type peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
FKBP-type peptidyl-prolyl cis-trans isomerase Tax=RBG_16_Archaea_50_20_curated
FKBP-type peptidylprolyl isomerase id=14428048 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
13_1_40cm_2_scaffold_15447_4
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(2105..3250)
DNA (1146bp) protein (382aa)
Putative uncharacterized aminotransferase OR putativesoluble hydrogenase, small subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9P6_NITGG
aminotransferase OR putativesoluble hydrogenase, small subunit Tax=RBG_16_Bathyarchaeota_48_13_curated
aminotransferase OR putativesoluble hydrogenase, small subunit
13_1_40cm_2_scaffold_15447_5
Pyrobaculum islandicum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

3355..4086
DNA (732bp) protein (244aa)
Putative uncharacterized protein n=1 Tax=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) RepID=A1RQF4_PYRIL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL87186.1}; TaxID=384616 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum islandicum (str
13_1_40cm_2_scaffold_15447_6
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(4079..4603)
DNA (525bp) protein (175aa)
hypothetical protein; K00952 nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] Tax=RBG_16_Bathyarchaeota_48_13_curated
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B7Y6_ACIHW
nicotinamide-nucleotide adenylyltransferase
13_1_40cm_2_scaffold_15447_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(4604..5179)
DNA (576bp) protein (192aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=RBG_13_Bathyarchaeota_38_9_curated
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ7 RepID=UPI0003647A6B
methylated-DNA--protein-cysteine methyltransferase
13_1_40cm_2_scaffold_15447_8
Vulcanisaeta distributa, Vulcanisaeta, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

5240..6322
DNA (1083bp) protein (361aa)
RNA 3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4
RNA 3'-terminal phosphate cyclase n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QU85_VULDI rbh
13_1_40cm_2_scaffold_15447_9
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(6708..7145)
DNA (438bp) protein (146aa)
id=1250844 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
id=1250844 Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
13_1_40cm_2_scaffold_15447_10
unknown

Not on your lists

comp(7514..8017)
DNA (504bp) protein (168aa)

This feature has no annotations

13_1_40cm_2_scaffold_15447_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8336..9112)
DNA (777bp) protein (259aa)
diphthine synthase (EC:2.1.1.98); K00586 diphthine synthase [EC:2.1.1.98] Tax=RBG_13_Bathyarchaeota_38_9_curated
diphthine synthase (EC:2.1.1.98)
Diphthine synthase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZM65_THELI
13_1_40cm_2_scaffold_15447_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(9275..11044)
DNA (1770bp) protein (590aa)
Putative circadian clock protein, KaiC n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1S0H8_THEPD
putative circadian clock protein, KaiC
Tax=RBG_16_Archaea_50_20_curated
13_1_40cm_2_scaffold_15447_13
unknown

Not on your lists

comp(11172..11411)
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_40cm_2_scaffold_15447_14
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11682..12212
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N1E6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMR01041.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV
hypothetical protein
13_1_40cm_2_scaffold_15447_15
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

12240..12623
DNA (384bp) protein (128aa)
PBS lyase HEAT-like repeat protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3CZT9_9ARCH
HEAT repeat-containing PBS lyase Tax=RBG_16_Archaea_50_20_curated
HEAT repeat-containing PBS lyase
Displaying 15 items

View Taxonomy