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13_1_40cm_2_scaffold_2664

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2664_1
unknown

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296..757
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_40cm_2_scaffold_2664_2
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(667..1227)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI000367FE1C
hypothetical protein
hypothetical protein Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_40cm_2_scaffold_2664_3
RBG_16_Archaea_50_20_curated, Archaea

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1308..2555
DNA (1248bp) protein (416aa)
asparaginyl-tRNA synthetase; K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] Tax=RBG_16_Archaea_50_20_curated
Asparaginyl-tRNA synthetase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8T9_9ARCH
asparaginyl-tRNA synthetase
13_1_40cm_2_scaffold_2664_4
AR15, Woesearchaeaota, DPANN, Archaea

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comp(2736..3491)
DNA (756bp) protein (252aa)
UPI000038E2D0 related cluster id=5800598 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
UPI000038E2D0 related cluster Tax=AR15
13_1_40cm_2_scaffold_2664_5
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3587..4240
DNA (654bp) protein (218aa)
HTH DNA binding domain n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CSP1_METMJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC15498.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_2_scaffold_2664_6
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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comp(4375..5328)
DNA (954bp) protein (318aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:BAJ47304.1}; EC=1.1.1.95 {ECO:0000313|EMBL:BAJ47304.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Cal
D-3-phosphoglycerate dehydrogenase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N4T5_9ARCH
13_1_40cm_2_scaffold_2664_7
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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comp(5329..6723)
DNA (1395bp) protein (465aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3] Tax=RBG_13_Bathyarchaeota_38_9_curated
440aa long hypothetical NADH oxidase n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O59178_PYRHO
NADH oxidase
13_1_40cm_2_scaffold_2664_8
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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6829..7620
DNA (792bp) protein (264aa)
fructose-bisphosphate aldolase (EC:4.1.2.13); K01623 fructose-bisphosphate aldolase, class I [EC:4.1.2.13] Tax=RBG_16_Thaumarchaeota_49_8_curated
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QTX7_VULDI
13_1_40cm_2_scaffold_2664_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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7680..8366
DNA (687bp) protein (229aa)
triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Triosephosphate isomerase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AG09_PYRYC
triosephosphate isomerase
13_1_40cm_2_scaffold_2664_10

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8575..8850
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL05752.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_2_scaffold_2664_11
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8935..9591
DNA (657bp) protein (219aa)
Cytochrome c oxidase subunit II n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HAG6_9EURY
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:ELZ81465.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 1
cytochrome C oxidase subunit II
13_1_40cm_2_scaffold_2664_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9593..12022
DNA (2430bp) protein (810aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon JGI 0000001-H6 RepID=UPI000370EEDD rbh
Heme/copper-type cytochrome/quinol oxidase, subunit 1 {ECO:0000313|EMBL:EJN58781.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum sa
heme/copper-type cytochrome/quinol oxidase subunit 1
13_1_40cm_2_scaffold_2664_13
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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12223..13182
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E310_9ARCH
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AJW71003.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.
13_1_40cm_2_scaffold_2664_14

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comp(13286..13729)
DNA (444bp) protein (148aa)
Putative copper-binding protein, plastocyanin/azurin family protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW97P9 RepID=B3T3H2_9ARCH
Blue (Type1) copper domain-containing protein {ECO:0000313|EMBL:AIF05262.1}; TaxID=1456064 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_181_D
blue (type1) copper domain-containing protein
13_1_40cm_2_scaffold_2664_15
RBG_16_Archaea_50_20_curated, Archaea

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13894..14868
DNA (975bp) protein (325aa)
geranylgeranylglyceryl diphosphate synthase (EC:2.5.1.10 2.5.1.1 2.5.1.29); K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RBG_16_Archaea_50_20_curated
idsA; IdsA (EC:2.5.1.10 2.5.1.1)
IdsA n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=Q2NG10_METST
13_1_40cm_2_scaffold_2664_16

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15154..15318
DNA (165bp) protein (55aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 3 (NuoA) {ECO:0000313|EMBL:AIF08039.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AIF08039.1};; TaxID=1456108 species="Archaea; Thaumarchaeota; environmental samp
13_1_40cm_2_scaffold_2664_17
RBG_16_Archaea_50_20_curated, Archaea

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15326..16327
DNA (1002bp) protein (334aa)
nuoH; NADH-quinone oxidoreductase subunit H (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
nuoH; NADH-quinone oxidoreductase subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9U2_NITGG
13_1_40cm_2_scaffold_2664_18
RBG_16_Archaea_50_20_curated, Archaea

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16334..16828
DNA (495bp) protein (165aa)
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5) Tax=RBG_16_Archaea_50_20_curated
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit J n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGX3_NITGG
13_1_40cm_2_scaffold_2664_19
RBG_16_Archaea_50_20_curated, Archaea

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16833..17141
DNA (309bp) protein (103aa)
NADH-ubiquinone oxidoreductase subunit 4L; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] id=14427491 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
NADH-ubiquinone oxidoreductase subunit 4L Tax=RBG_16_Archaea_50_20_curated
NADH-ubiquinone oxidoreductase subunit 4L
13_1_40cm_2_scaffold_2664_20
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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17149..18654
DNA (1506bp) protein (502aa)
formate hydrogenlyase subunit 3/Multisubunit Na/H antiporter (EC:1.6.5.3)
Proton-translocating NADH-quinone oxidoreductase, chain M n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUP1_9ARCH
proton-translocating NADH-quinone oxidoreductase subunit M Tax=RBG_16_Thaumarchaeota_49_8_curated
13_1_40cm_2_scaffold_2664_21

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18661..20742
DNA (2082bp) protein (694aa)
NADH-ubiquinone oxidoreductase subunit L (NuoL) {ECO:0000313|EMBL:AIF12403.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AIF12403.1};; TaxID=1456198 species="Archaea; Thaumarchaeota; environmental samples.;" sourc
NADH dehydrogenase subunit L (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit L n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9U5_NITGG
13_1_40cm_2_scaffold_2664_22
RBG_16_Archaea_50_20_curated, Archaea

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20723..22150
DNA (1428bp) protein (476aa)
nuoM; proton-translocating NAD(P)H-quinone oxidoreductase, chain M; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RBG_16_Archaea_50_20_curated
Proton-translocating NAD(P)H-quinone oxidoreductase, chain M id=3984446 bin=GWF2_OP3_43_52 species=unknown genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
nuoM; proton-translocating NAD(P)H-quinone oxidoreductase subunit M
13_1_40cm_2_scaffold_2664_23
RBG_16_Archaea_50_20_curated, Archaea

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22248..23606
DNA (1359bp) protein (453aa)
NADH-ubiquinone oxidoreductase subunit N (EC:1.6.5.3); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RBG_16_Archaea_50_20_curated
nuoN; NADH-quinone oxidoreductase subunit N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIZ0_NITGG
13_1_40cm_2_scaffold_2664_24
unknown

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comp(23577..24182)
DNA (606bp) protein (202aa)

This feature has no annotations

13_1_40cm_2_scaffold_2664_25
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(24260..25177)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00037F821B
UBA/THIF-type NAD/FAD binding protein; K11996 adenylyltransferase and sulfurtransferase Tax=RBG_13_Bathyarchaeota_46_16b_curated
UBA/THiF-type NAD/FAD binding protein
Displaying 25 items

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