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13_1_40cm_2_scaffold_1214

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Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1214_1

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comp(2..1987)
DNA (1986bp) protein (662aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 213 RepID=E3T6W7_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADC36061.1}; TaxID=698383 species="Bacteria; environmental samples.;" source="uncultured bacterium 213.;"
13_1_40cm_2_scaffold_1214_2
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

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2249..3490
DNA (1242bp) protein (414aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z377_DESAT
lipoprotein releasing system, transmembrane protein, LolC/E family; K09808 lipoprotein-releasing system permease protein Tax=RBG_13_Aminicenantes_62_12_curated
lipoprotein releasing system, transmembrane protein, LolC/E family
13_1_40cm_2_scaffold_1214_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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3483..4223
DNA (741bp) protein (247aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Ord
Phosphonate-transporting ATPase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGH0_RHOMR
ABC transporter
13_1_40cm_2_scaffold_1214_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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4262..6670
DNA (2409bp) protein (803aa)
clpC; ATP-dependent Clp protease, ATP-binding subunit ClpC; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC id=12555145 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
clpC; ATP-dependent Clp protease, ATP-binding subunit ClpC
13_1_40cm_2_scaffold_1214_5
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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6679..9330
DNA (2652bp) protein (884aa)
outer membrane protein assembly complex, YaeT protein; K07277 outer membrane protein Tax=RBG_13_Acidobacteria_68_16_curated
surface antigen (D15) id=12555146 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Surface antigen (D15)
13_1_40cm_2_scaffold_1214_6
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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9314..9685
DNA (372bp) protein (124aa)
hypothetical protein n=4 Tax=Aminicenantes RepID=UPI00037FBA27
Uncharacterized protein {ECO:0000313|EMBL:KDA53615.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
surface antigen (D15)
13_1_40cm_2_scaffold_1214_7
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9784..10392
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000373F19D
outer membrane protein; K06142 outer membrane protein Tax=RBG_16_Deltaproteobacteria_54_11_curated
membrane protein
13_1_40cm_2_scaffold_1214_8
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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10404..11507
DNA (1104bp) protein (368aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23
UDP-3-O-acylglucosamine N-acyltransferase n=2 Tax=Geobacter metallireducens RepID=LPXD_GEOMG
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
13_1_40cm_2_scaffold_1214_9
R_NC10_66_22, NC10, Bacteria

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11539..12015
DNA (477bp) protein (159aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG27_9BACT
13_1_40cm_2_scaffold_1214_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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12012..12797
DNA (786bp) protein (262aa)
acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129); K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Acidithiobacillus caldus (strain SM-1) RepID=F9ZM20_ACICS
13_1_40cm_2_scaffold_1214_11
CSP1_5_NC10, NC10, Bacteria

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12809..13774
DNA (966bp) protein (322aa)
dehydrogenase id=14429943 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10 rbh
dehydrogenase Tax=CSP1_5_NC10
oxidoreductase domain-containing protein
13_1_40cm_2_scaffold_1214_12
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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13786..14880
DNA (1095bp) protein (365aa)
Beta-lactamase class C and other penicillin binding proteins n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIP5_CHLTF
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:CDM65540.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methyla
class C beta-lactamase
13_1_40cm_2_scaffold_1214_13
unknown

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14916..16064
DNA (1149bp) protein (383aa)

This feature has no annotations

13_1_40cm_2_scaffold_1214_14
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(16072..18414)
DNA (2343bp) protein (781aa)
Amidohydrolase {ECO:0000313|EMBL:AKF79623.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulv
13_1_40cm_2_scaffold_1214_15
R_Deltaproteobacteria_50_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18372..20399)
DNA (2028bp) protein (676aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_50_16_curated
13_1_40cm_2_scaffold_1214_16
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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20628..21194
DNA (567bp) protein (189aa)
Methyltransferase small n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RJY6_MOOTA
methyltransferase small
Methyltransferase small {ECO:0000313|EMBL:ABC19253.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moor
13_1_40cm_2_scaffold_1214_17
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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21191..23536
DNA (2346bp) protein (782aa)
Putative uncharacterized protein id=3545375 bin=GWF2_Lentisphaerae_57_35 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein Tax=GWF2_Lentisphaerae_57_35_curated
hypothetical protein
13_1_40cm_2_scaffold_1214_18
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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23704..25158
DNA (1455bp) protein (485aa)
Peptidoglycan-binding lysin domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKA6_HALO1
Uncharacterized protein {ECO:0000313|EMBL:KDA53329.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
peptidoglycan-binding lysin domain-containing protein
13_1_40cm_2_scaffold_1214_19
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(25152..25724)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI00039CCFAF
hypothetical protein; K09141 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
AMMECR1-domain-containing protein
13_1_40cm_2_scaffold_1214_20
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(25735..27099)
DNA (1365bp) protein (455aa)
General secretory system II protein E domain protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WL66_GEOS8
general secretory system II protein E domain-containing protein Tax=GWD2_Desulfuromonadales_61_12_curated
general secretory system II protein E domain-containing protein
13_1_40cm_2_scaffold_1214_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(27185..29401)
DNA (2217bp) protein (739aa)
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] id=12555521 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
polynucleotide phosphorylase
13_1_40cm_2_scaffold_1214_22
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(29703..29972)
DNA (270bp) protein (90aa)
UPI0003D6703D related cluster n=1 Tax=unknown RepID=UPI0003D6703D
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SSU ribosomal protein S15p (S13e)
13_1_40cm_2_scaffold_1214_23
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(30107..31030)
DNA (924bp) protein (308aa)
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] id=12555519 bin=CNBR_ACIDO species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tRNA pseudouridine synthase B (EC:4.2.1.70) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
tRNA pseudouridine synthase B (EC:4.2.1.70)
13_1_40cm_2_scaffold_1214_24
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31036..31410)
DNA (375bp) protein (125aa)
Ribosome-binding factor A n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KDN5_9FIRM
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" s
13_1_40cm_2_scaffold_1214_25
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(31451..31735)
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01W30_SOLUE
hypothetical protein; K09764 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
13_1_40cm_2_scaffold_1214_26
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(31770..34523)
DNA (2754bp) protein (918aa)
Translation initiation factor IF-2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=IF2_SOLUE
translation initiation factor 2
Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Sol
13_1_40cm_2_scaffold_1214_27
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(34524..36101)
DNA (1578bp) protein (526aa)
nusA; transcription termination factor NusA; K02600 N utilization substance protein A Tax=RBG_16_Acidobacteria_70_10_curated
NusA antitermination factor; K02600 N utilization substance protein A id=12555515 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nusA; transcription termination factor NusA
13_1_40cm_2_scaffold_1214_28
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(36141..36569)
DNA (429bp) protein (143aa)
Ribosome maturation factor RimP n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=RIMP_PELPD
hypothetical protein
Ribosome maturation factor RimP {ECO:0000255|HAMAP-Rule:MF_01077}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelob
Displaying 28 items

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