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13_1_40cm_2_scaffold_1371

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1371_1
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3..1790
DNA (1788bp) protein (596aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y329_SORCE
Disulfide bond oxidoreductase D family protein
Disulfide bond oxidoreductase D family protein {ECO:0000313|EMBL:AIC15655.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" s
13_1_40cm_2_scaffold_1371_2
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1851..3389
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EW29_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CCV09224.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium met
capsule synthesis CapA-like protein
13_1_40cm_2_scaffold_1371_3
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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comp(3400..4290)
DNA (891bp) protein (297aa)
Putative salt-induced outer membrane protein-like protein id=24423508 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Putative salt-induced outer membrane protein-like protein Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
13_1_40cm_2_scaffold_1371_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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4394..6034
DNA (1641bp) protein (547aa)
Two-component hybrid sensor and regulator n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89EQ6_BRADU
bacteriophytochrome (light-regulated signal transduction histidine kinase) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
two-component hybrid sensor and regulator
13_1_40cm_2_scaffold_1371_5

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6059..7684
DNA (1626bp) protein (542aa)
Lipase maturation factor 1 n=1 Tax=uncultured bacterium AOCefta2 RepID=D6MLW0_9BACT
Lipase maturation factor 1 {ECO:0000313|EMBL:ACS83700.1}; TaxID=654977 species="Bacteria; environmental samples.;" source="uncultured bacterium AOCefta2.;"
hypothetical protein
13_1_40cm_2_scaffold_1371_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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8104..10146
DNA (2043bp) protein (681aa)
hypothetical protein; K07114 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=4221592 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_1371_7
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

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10148..10777
DNA (630bp) protein (210aa)
sortase family protein, Peptidase C60; K07284 sortase A [EC:3.4.22.70] Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z1M6_9BRAD
conserved protein of unknown function[Include sortase family domain]
13_1_40cm_2_scaffold_1371_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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10925..11620
DNA (696bp) protein (232aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Putative uncharacterized protein id=2280520 bin=GWB2_Ignavibacteria_35_12 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
13_1_40cm_2_scaffold_1371_9
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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11613..13925
DNA (2313bp) protein (771aa)
multi-sensor hybrid histidine kinase (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
Integral membrane sensor hybrid histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK45_9BACT
multi-sensor hybrid histidine kinase
13_1_40cm_2_scaffold_1371_10
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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13903..15078
DNA (1176bp) protein (392aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
13_1_40cm_2_scaffold_1371_11
unknown

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15148..15288
DNA (141bp) protein (47aa)

This feature has no annotations

13_1_40cm_2_scaffold_1371_12
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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15376..15942
DNA (567bp) protein (189aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53521.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
id=3720805 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
13_1_40cm_2_scaffold_1371_13
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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16037..16396
DNA (360bp) protein (120aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39PR4_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB33760.1}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallire
13_1_40cm_2_scaffold_1371_14
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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16427..17350
DNA (924bp) protein (308aa)
Homocysteine S-methyltransferase id=3608933 bin=GWC2_Chloroflexi_73_18 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
homocysteine S-methyltransferase
Homocysteine S-methyltransferase {ECO:0000313|EMBL:ADB15856.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula stal
13_1_40cm_2_scaffold_1371_15
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(17431..18885)
DNA (1455bp) protein (485aa)
hypothetical protein Tax=RBG_13_Acidobacteria_68_16_curated
hypothetical protein id=24447192 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=Maribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Displaying 15 items

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