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13_1_40cm_2_scaffold_15739

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_15739_1
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..131)
DNA (129bp) protein (43aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H710_ANADF
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:ABS24506.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaero
13_1_40cm_2_scaffold_15739_2
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(144..575)
DNA (432bp) protein (144aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V3R0_TERSS
Uncharacterized protein {ECO:0000313|EMBL:KDA53002.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
biopolymer transport membrane protein, TolR-related
13_1_40cm_2_scaffold_15739_3
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(583..1260)
DNA (678bp) protein (226aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029K1_SOLUE
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB Tax=RBG_13_Acidobacteria_68_16_curated
MotA/TolQ/ExbB proton channel
13_1_40cm_2_scaffold_15739_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(1299..2054)
DNA (756bp) protein (252aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53004.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
TonB-like protein; K03832 periplasmic protein TonB id=24433698 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
TonB protein
13_1_40cm_2_scaffold_15739_5
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(2138..2986)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00036E83BC
Uncharacterized protein {ECO:0000313|EMBL:KDA53005.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
13_1_40cm_2_scaffold_15739_6
Tolypothrix bouteillei, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(3267..3620)
DNA (354bp) protein (118aa)
RNA polymerase sigma factor n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003449C0A
RNA polymerase sigma factor, cyanobacterial RpoD-like family
RNA polymerase sigma factor {ECO:0000313|EMBL:KIE07655.1}; TaxID=1479485 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix bouteillei VB521301.;"
13_1_40cm_2_scaffold_15739_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

4003..4827
DNA (825bp) protein (275aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RBG_16_RIF_WS3X_71_46_curated
DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.- 4.2.99.18)
Endonuclease III n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QL40_DESB2 id=5223723 bin=16ft_combo_ws3_JS1 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
13_1_40cm_2_scaffold_15739_8
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4751..5062)
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:KII00186.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
13_1_40cm_2_scaffold_15739_9
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(5086..5931)
DNA (846bp) protein (282aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RBG_16_Nitrospirae_64_22_curated
Diaminopimelate epimerase id=4873761 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
diaminopimelate epimerase
13_1_40cm_2_scaffold_15739_10
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

comp(5955..7106)
DNA (1152bp) protein (384aa)
fibronectin, type III domain-containing protein Tax=RBG_13_Aminicenantes_62_12_curated
Putative Fibronectin, type III id=4958132 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
fibronectin, type III
13_1_40cm_2_scaffold_15739_11
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7108..8505)
DNA (1398bp) protein (466aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGH8_CHLTF
hslU; ATP-dependent protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
heat shock protein HslVU, ATPase subunit HslU
13_1_40cm_2_scaffold_15739_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(8505..9035)
DNA (531bp) protein (177aa)
ATP dependent peptidase subunit CodW; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] id=12555772 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ATP-dependent protease peptidase subunit
13_1_40cm_2_scaffold_15739_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9079..11163)
DNA (2085bp) protein (695aa)
CoA-binding domain protein n=1 Tax=Bacillus tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WXF1_BACT2 id=5223885 bin=16ft_combo_ws3_JS1 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
CoA-binding protein Tax=GWC2_Gemmatimonadetes_71_10_curated
CoA-binding protein
13_1_40cm_2_scaffold_15739_14
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11197..11436
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B60223
hypothetical protein Tax=RBG_13_Deltaproteobacteria_58_19_curated
hypothetical protein
13_1_40cm_2_scaffold_15739_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

11599..12138
DNA (540bp) protein (180aa)
putative protein-S-isoprenylcysteine methyltransferase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 15 items

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