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13_1_40cm_2_scaffold_1831

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1831_1

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1..216
DNA (216bp) protein (72aa)
Phosphatidylglycerophosphatase A n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QQ87_CHLP8
Uncharacterized protein {ECO:0000313|EMBL:KKK60457.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phosphatidylglycerophosphatase A
13_1_40cm_2_scaffold_1831_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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213..1160
DNA (948bp) protein (316aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=454194 species="Bacteria; Acidobacteri
Riboflavin biosynthesis protein RibF id=1871068 bin=GWB2_Proteobacteria_55_19 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
ribF; riboflavin kinase and FAD synthetase
13_1_40cm_2_scaffold_1831_3
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(1138..1425)
DNA (288bp) protein (96aa)
hypothetical protein Tax=GWC2_Nitrospirae_57_13_curated
Uncharacterized protein id=1781406 bin=GWD2_Nitrospirae-related_57_8 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
13_1_40cm_2_scaffold_1831_4
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

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1527..2195
DNA (669bp) protein (223aa)
tmk; thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] Tax=GWC2_Nitrospirae_56_14_curated
Thymidylate kinase id=4078404 bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
dTMP kinase
13_1_40cm_2_scaffold_1831_5
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2192..3334
DNA (1143bp) protein (381aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III delta prime subunit n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QPT7_9DELT
DNA polymerase III delta prime subunit {ECO:0000313|EMBL:EPX63334.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacte
13_1_40cm_2_scaffold_1831_6
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3344..5086
DNA (1743bp) protein (581aa)
ABC transporter, ATP-binding/membrane protein n=2 Tax=Geobacter metallireducens RepID=Q39Q39_GEOMG rbh
ABC transporter ATP-binding protein/membrane protein
ABC transporter, ATP-binding/membrane protein {ECO:0000313|EMBL:ABB33635.2}; TaxID=269799 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" sourc
13_1_40cm_2_scaffold_1831_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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5083..6912
DNA (1830bp) protein (610aa)
ABC transporter, ATPase subunit; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial id=24433595 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ABC transporter ATP-binding protein/membrane protein
13_1_40cm_2_scaffold_1831_8
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(6871..7221)
DNA (351bp) protein (117aa)
Methylated-DNA-(Protein)-cysteine S-methyltransferase DNA binding n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M077_GEODF
methylated-DNA-(protein)-cysteine S-methyltransferase; K07443 methylated-DNA-protein-cysteine methyltransferase related protein Tax=RBG_16_Chloroflexi_56_8_curated
methylated-DNA-(protein)-cysteine S-methyltransferase
13_1_40cm_2_scaffold_1831_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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7266..8330
DNA (1065bp) protein (355aa)
peptidase S58, DmpA id=14625961 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
peptidase S58, DmpA Tax=CSP1_6_Rokubacteria
DmpA2; L-aminopeptidase/D-esterase
13_1_40cm_2_scaffold_1831_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(8362..9531)
DNA (1170bp) protein (390aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
aroC; chorismate synthase (EC:4.2.3.5) id=14431003 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
chorismate synthase (EC:4.2.3.5)
13_1_40cm_2_scaffold_1831_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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9889..11487
DNA (1599bp) protein (533aa)
Putative carbohydrate kinase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFT5_9BACT rbh
yjeF; carbohydrate kinase
Putative carbohydrate kinase {ECO:0000313|EMBL:CBE68616.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_2_scaffold_1831_12
unknown

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11484..12143
DNA (660bp) protein (220aa)

This feature has no annotations

13_1_40cm_2_scaffold_1831_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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12152..12580
DNA (429bp) protein (143aa)
hypothetical protein; K06925 UPF0079 ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Predicted ATPase or kinase id=2256068 bin=GWA2_OP3_53_43 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein
13_1_40cm_2_scaffold_1831_14
CSP1_5_NC10, NC10, Bacteria

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comp(12587..14050)
DNA (1464bp) protein (488aa)
guaB; inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (IMPD) (EC:1.1.1.205) id=14429458 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10 rbh
guaB; inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (IMPD) (EC:1.1.1.205) Tax=CSP1_5_NC10
inosine-5-monophosphate dehydrogenase (EC:1.1.1.205)
13_1_40cm_2_scaffold_1831_15
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(14089..15561)
DNA (1473bp) protein (491aa)
Protein translocase subunit SecA (Fragment) n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFI9_9BACT
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
secA; preprotein translocase subunit SecA
Displaying 15 items

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