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13_1_40cm_2_scaffold_262

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_262_1
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..627
DNA (627bp) protein (209aa)
Patatin-like phospholipase domain protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A8G3_PELCD
alpha-beta hydrolase family esterase Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
patatin-like phospholipase domain-containing protein
13_1_40cm_2_scaffold_262_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

645..2645
DNA (2001bp) protein (667aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FC217
asmA_[H]; AsmA family protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
AsmA protein
13_1_40cm_2_scaffold_262_3
unknown

Not on your lists

comp(2672..3130)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_2_scaffold_262_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

3366..5387
DNA (2022bp) protein (674aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA54347.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
FecR domain protein id=24475895 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
13_1_40cm_2_scaffold_262_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5442..5969
DNA (528bp) protein (176aa)
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
peptide deformylase id=12556999 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptide deformylase
13_1_40cm_2_scaffold_262_6
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

6052..7017
DNA (966bp) protein (322aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=171953 species="B
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SEM9_9BACT
13_1_40cm_2_scaffold_262_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6977..8353
DNA (1377bp) protein (459aa)
sun; Sun protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Sun protein n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A8C1_THEID
sun protein
13_1_40cm_2_scaffold_262_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

8391..9188
DNA (798bp) protein (266aa)
PASTA domain-containing protein id=24588768 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
PASTA domain-containing protein Tax=RBG_16_RIF_WS3X_71_46_curated
serine/threonine protein kinase with PASTA sensor(s)
13_1_40cm_2_scaffold_262_9
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9175..9906
DNA (732bp) protein (244aa)
Ribulose-phosphate 3-epimerase id=3203733 bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
rpe; ribulose-phosphate 3-epimerase
Tax=BJP_IG2157_Desulfuromonadales_56_134
13_1_40cm_2_scaffold_262_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

9911..10309
DNA (399bp) protein (133aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Thioesterase superfamily protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QYK8_ISOPI
thioesterase superfamily protein
13_1_40cm_2_scaffold_262_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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10306..11151
DNA (846bp) protein (282aa)
Beta-barrel assembly machine subunit BamD Tax=RBG_16_Acidobacteria_70_10_curated
Tetratricopeptide repeat domain protein id=3311907 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tetratricopeptide TPR_2
13_1_40cm_2_scaffold_262_12
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

11148..12056
DNA (909bp) protein (303aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XLV7_LEEBM
family 2 glycosyl transferase
Tax=BJP_IG2102_BRC1_58_13
13_1_40cm_2_scaffold_262_13
GWA2_Planctomycetes_40_7_curated, Planctomycetes, Bacteria

Not on your lists

12053..13210
DNA (1158bp) protein (386aa)
Glycosyltransferase id=4384948 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
group 1 glycosyl transferase Tax=GWA2_Planctomycetes_40_7_curated
glycosyltransferase
13_1_40cm_2_scaffold_262_14
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13210..14235
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI0003626B76
radical SAM domain protein
Radical SAM domain protein {ECO:0000313|EMBL:ACS79122.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfo
13_1_40cm_2_scaffold_262_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14249..15253)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JB05_ANAD2
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_2_scaffold_262_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15361..15876
DNA (516bp) protein (172aa)
CarD family transcriptional regulator; K07736 CarD family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
CarD family transcriptional regulator; K07736 CarD family transcriptional regulator id=12555392 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
CarD family transcriptional regulator
13_1_40cm_2_scaffold_262_17
bacterium UASB270, Bacteria

Not on your lists

16000..17766
DNA (1767bp) protein (589aa)
fibronectin-binding A domain-containing protein id=24412587 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Fibronectin-binding A domain protein {ECO:0000313|EMBL:GAK59976.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
fibronectin-binding protein
13_1_40cm_2_scaffold_262_18
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(17773..18531)
DNA (759bp) protein (253aa)
Putative histidine biosynthesis protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA7_9BACT
histidine biosynthesis protein
Putative histidine biosynthesis protein {ECO:0000313|EMBL:CBE69729.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfe
13_1_40cm_2_scaffold_262_19

Not on your lists

18602..19687
DNA (1086bp) protein (362aa)
Conserved protein Orf1 n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIS6_9BACT
Conserved protein Orf1 {ECO:0000313|EMBL:AAY96685.1}; TaxID=333425 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-4.;"
hypothetical protein
13_1_40cm_2_scaffold_262_20

Not on your lists

19630..20676
DNA (1047bp) protein (349aa)
Putative tetrahydromethanopterin biosynthesis protein n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIP6_9BACT
Putative tetrahydromethanopterin biosynthesis protein {ECO:0000313|EMBL:AAY89268.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
tetrahydromethanopterin biosynthesis protein
13_1_40cm_2_scaffold_262_21
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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20790..21500
DNA (711bp) protein (237aa)
Putative Delta 1-pyrroline-5-carboxylate synthetase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKC4_9BACT
Delta 1-pyrroline-5-carboxylate synthetase
Putative Delta 1-pyrroline-5-carboxylate synthetase {ECO:0000313|EMBL:CBE69746.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomir
13_1_40cm_2_scaffold_262_22
Methanocaldococcus sp. JH146, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(21397..22077)
DNA (681bp) protein (227aa)
UPF0264 protein MFS40622_1222 n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S4Y5_METSF
hypothetical protein
UPF0264 protein JH146_0793 {ECO:0000256|HAMAP-Rule:MF_00681}; TaxID=1301915 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methano
13_1_40cm_2_scaffold_262_23
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

22380..22874
DNA (495bp) protein (165aa)
fae; formaldehyde activating enzyme (Fae) (EC:4.3.-.-)
Formaldehyde activating enzyme (Fae) {ECO:0000313|EMBL:CBE67531.1}; EC=4.3.-.- {ECO:0000313|EMBL:CBE67531.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" s
Formaldehyde activating enzyme (Fae) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJU8_9BACT
13_1_40cm_2_scaffold_262_24
CSP1_5_NC10, NC10, Bacteria

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22887..23780
DNA (894bp) protein (298aa)
methylene tetrahydromethanopterin dehydrogenase (mtdB) (EC:1.5.1.-) id=14429001 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
methylene tetrahydromethanopterin dehydrogenase (mtdB) (EC:1.5.1.-) Tax=CSP1_5_NC10
methylene tetrahydromethanopterin dehydrogenase (mtdB) (EC:1.5.1.-)
13_1_40cm_2_scaffold_262_25
CSP1_5_NC10, NC10, Bacteria

Not on your lists

23777..25045
DNA (1269bp) protein (423aa)
hypothetical protein id=14429023 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_2_scaffold_262_26
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25123..25608
DNA (486bp) protein (162aa)
Tax=RBG_16_Anaeromyxobacter_69_14_curated
13_1_40cm_2_scaffold_262_27
R_NC10_66_22, NC10, Bacteria

Not on your lists

25601..25888
DNA (288bp) protein (96aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
13_1_40cm_2_scaffold_262_28
CSP1_5_NC10, NC10, Bacteria

Not on your lists

25949..26698
DNA (750bp) protein (250aa)
fabG; 3-oxoacyl-(Acyl-carrier protein) reductase (EC:1.1.1.100) id=14429015 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
fabG; 3-oxoacyl-(Acyl-carrier protein) reductase (EC:1.1.1.100) Tax=CSP1_5_NC10
fabG; 3-oxoacyl-(Acyl-carrier protein) reductase (EC:1.1.1.100)
13_1_40cm_2_scaffold_262_29
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

26689..28143
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67548.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_2_scaffold_262_30
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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28140..28517
DNA (378bp) protein (126aa)
Dihydroneopterin aldolase FolB id=4110413 bin=GWC2_Chloroflexi_73_18 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
folB; dihydroneopterin aldolase FolB Tax=GWC2_RIF_CHLX_73_18_curated
dihydroneopterin aldolase
Displaying items 1-30 of 35 in total

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