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13_1_40cm_2_scaffold_6299

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_6299_1
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(1..771)
DNA (771bp) protein (257aa)
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14) Tax=RBG_13_OP8X_37_8_curated
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14) id=14429213 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14)
13_1_40cm_2_scaffold_6299_2
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(762..1220)
DNA (459bp) protein (153aa)
F0F1 ATP synthase subunit beta; K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
atpD; F0F1 ATP synthase subunit beta (EC:3.6.3.14)
F0F1 ATP synthase subunit beta n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003638ABD
13_1_40cm_2_scaffold_6299_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1297..2001)
DNA (705bp) protein (235aa)
Membrane-flanked domain DUF304 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPQ9_NIAKG
membrane protein
Membrane-flanked domain DUF304 {ECO:0000313|EMBL:AEV98892.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella kore
13_1_40cm_2_scaffold_6299_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2026..2937)
DNA (912bp) protein (304aa)
ATP synthase F1 subunit gamma (EC:3.6.3.15); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
atpG; ATP synthase subunit gamma, membrane-bound, F1 sector (EC:3.6.3.14) id=14625285 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
atpG; ATP synthase F1 subunit gamma (EC:3.6.3.14)
13_1_40cm_2_scaffold_6299_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(2966..4492)
DNA (1527bp) protein (509aa)
ATP synthase F0F1 subunit alpha (EC:3.6.3.15); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
atpA; ATP synthase subunit alpha, membrane-bound, F1 sector (EC:3.6.3.14) id=14429215 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ATP synthase F0F1 subunit alpha (EC:3.6.3.15)
13_1_40cm_2_scaffold_6299_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(4518..5099)
DNA (582bp) protein (194aa)
ATP synthase subunit delta n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=ATPD_SOLUE
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
ATP synthase F1 subunit delta
13_1_40cm_2_scaffold_6299_7
unknown

Not on your lists

5563..6114
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_40cm_2_scaffold_6299_8
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

comp(6174..6620)
DNA (447bp) protein (149aa)
Cell shape determination protein CcmA n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SEP0_9BACT
hypothetical protein Tax=RBG_13_RIF03_48_7_curated
hypothetical protein
13_1_40cm_2_scaffold_6299_9
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(6667..7533)
DNA (867bp) protein (289aa)
Chromosome segregation DNA-binding protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LF45_CHLTF
chromosome segregation DNA-binding protein
Chromosome segregation DNA-binding protein {ECO:0000313|EMBL:AEP12973.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium
13_1_40cm_2_scaffold_6299_10
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7487..8287)
DNA (801bp) protein (267aa)
ParA family protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZN8_CORCM
parA2; ParA family protein
ParA family protein {ECO:0000313|EMBL:AFE09732.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallo
13_1_40cm_2_scaffold_6299_11
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(8405..9046)
DNA (642bp) protein (214aa)
methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Ribosomal RNA small subunit methyltransferase G id=4972271 bin=GWA2_OP3_52_12 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
methyltransferase GidB
13_1_40cm_2_scaffold_6299_12
unknown

Not on your lists

9082..9987
DNA (906bp) protein (302aa)

This feature has no annotations

13_1_40cm_2_scaffold_6299_13
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(9875..11872)
DNA (1998bp) protein (666aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SEN6_9BACT
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=171953 species="Bacter
glucose inhibited division protein A
13_1_40cm_2_scaffold_6299_14
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(11869..13308)
DNA (1440bp) protein (480aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultur
tRNA modification GTPase MnmE n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SEN5_9BACT
tRNA modification GTPase trmE
13_1_40cm_2_scaffold_6299_15

Not on your lists

comp(13341..13877)
DNA (537bp) protein (179aa)
RNA-binding protein Jag n=1 Tax=Acidaminococcus sp. CAG:917 RepID=R7K7J6_9FIRM
Marine sediment metagenome DNA, contig: S03H2_L01085 {ECO:0000313|EMBL:GAH45551.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
single-stranded nucleic acid binding R3H domain-containing protein
13_1_40cm_2_scaffold_6299_16
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

comp(13933..15702)
DNA (1770bp) protein (590aa)
YidC/Oxa1 family membrane protein insertase; K03217 preprotein translocase subunit YidC id=24411426 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
YidC/Oxa1 family membrane protein insertase; K03217 preprotein translocase subunit YidC Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
oxaA; inner-membrane protein insertion factor OxaA
13_1_40cm_2_scaffold_6299_17
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(15923..16276)
DNA (354bp) protein (118aa)
ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SCK3_9BACT
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
13_1_40cm_2_scaffold_6299_18
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists


comp(16273..16407)
DNA (135bp) protein (45aa)
50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 id=12554749 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpmH; 50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
50S ribosomal protein L34
13_1_40cm_2_scaffold_6299_19
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

16990..18432
DNA (1443bp) protein (481aa)
Chromosomal replication initiator protein DnaA n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SEP2_9BACT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultu
chromosomal replication initiator protein DnaA
13_1_40cm_2_scaffold_6299_20
unknown

Not on your lists

18668..18784
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 20 items

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