ggKbase home page

13_1_40cm_2_scaffold_2383

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2383_1
unknown

Not on your lists

comp(2..316)
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_40cm_2_scaffold_2383_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

350..2785
DNA (2436bp) protein (812aa)
metal dependent phosphohydrolase (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
metal dependent phosphohydrolase (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] id=12555871 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glnD; nitrogen regulatory protein P-II uridylyltransferase, GlnD
13_1_40cm_2_scaffold_2383_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(2793..3125)
DNA (333bp) protein (111aa)
glnB; nitrogen regulatory protein P-II 1; K04751 nitrogen regulatory protein P-II 1 id=12555874 bin=CNBR_ACIDO species=Sphingobium sp. SYK-6 genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
nitrogen regulatory protein P-II
13_1_40cm_2_scaffold_2383_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3297..4862)
DNA (1566bp) protein (522aa)
glnEb; (glutamate-ammonia-ligase) adenylyltransferase subunit B (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
glnEb; (glutamate-ammonia-ligase) adenylyltransferase subunit B (EC:2.7.7.42)
(Glutamate-ammonia-ligase) adenylyltransferase, subunit B n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PD18_9BACT rbh
13_1_40cm_2_scaffold_2383_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4915..7086
DNA (2172bp) protein (724aa)
putative (Glutamate-ammonia-ligase) adenylyltransferase subunit A (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|SAAS:SAAS00086160}; EC=2.7.7.42 {ECO:0000256|SAAS:SAAS00086164, ECO:0000313|EMBL:CBK41126.1};; TaxID=330214 species="Bacteria; Nitrospirae; Ni
Putative (Glutamate-ammonia-ligase) adenylyltransferase, subunit A (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PD17_9BACT rbh
13_1_40cm_2_scaffold_2383_6
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7169..8578)
DNA (1410bp) protein (470aa)
glutamine synthetase, type I (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] Tax=CG_Rhodocyc_01
glnA; glutamine synthetase (EC:6.3.1.2)
glutamine synthetase n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037AB0D9 rbh
13_1_40cm_2_scaffold_2383_7
unknown

Not on your lists

comp(8843..9160)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_2_scaffold_2383_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

9344..9961
DNA (618bp) protein (206aa)
membrane protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein id=12554837 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_2_scaffold_2383_9
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

9958..10863
DNA (906bp) protein (302aa)
Putative lipoprotein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V3R8_TERSS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
putative lipoprotein
13_1_40cm_2_scaffold_2383_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

10868..11968
DNA (1101bp) protein (367aa)
ABC efflux pump, inner membrane subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IU86_KORVE
ABC efflux pump, inner membrane subunit Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
efflux ABC transporter inner membrane protein
13_1_40cm_2_scaffold_2383_11
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

12007..12741
DNA (735bp) protein (245aa)
ABC transporter, ATPase subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT27_KORVE
ABC transporter, ATPase subunit; K02003 putative ABC transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
ABC transporter ATPase
13_1_40cm_2_scaffold_2383_12
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

12738..13067
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGX9_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11479.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (stra
13_1_40cm_2_scaffold_2383_13
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

13071..13796
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUQ2_KORVE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
hypothetical protein
Displaying 13 items

View Taxonomy