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13_1_40cm_2_scaffold_27611

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_27611_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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1..1518
DNA (1518bp) protein (506aa)
TonB-dependent receptor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022M5_SOLUE
TonB-dependent receptor Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
TonB-dependent receptor
13_1_40cm_2_scaffold_27611_2
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1585..2814)
DNA (1230bp) protein (410aa)
NHL repeat-containing protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y4D1_9RHIZ
NHL repeat-containing protein {ECO:0000313|EMBL:EMS41721.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylob
NHL repeat containing protein
13_1_40cm_2_scaffold_27611_3
unknown

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comp(3104..3247)
DNA (144bp) protein (48aa)

This feature has no annotations

13_1_40cm_2_scaffold_27611_4
unknown

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comp(3589..3843)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_2_scaffold_27611_trna_2
unknown

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comp(4037..4120)
DNA (84bp)
transferRNA
13_1_40cm_2_scaffold_27611_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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4173..4853
DNA (681bp) protein (227aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=204669 species="Bacteria; Acidobacteria; Acido
Ribonuclease R n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJI5_KORVE
ribonuclease R
13_1_40cm_2_scaffold_27611_6
unknown

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comp(4768..5040)
DNA (273bp) protein (91aa)

This feature has no annotations

13_1_40cm_2_scaffold_27611_7
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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5062..6297
DNA (1236bp) protein (412aa)
RNAse R (EC:3.1.-.-); K12573 ribonuclease R [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Ribonuclease R n=2 Tax=Geobacter sulfurreducens RepID=D7AIS0_GEOSK
rnr; exoribonuclease R
13_1_40cm_2_scaffold_27611_trna_1
unknown

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6326..6399
DNA (74bp)
transferRNA
13_1_40cm_2_scaffold_27611_8
unknown

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6399..6734
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_40cm_2_scaffold_27611_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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6840..8135
DNA (1296bp) protein (432aa)
tRNA(Ile)-lysidine synthase {ECO:0000255|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000255|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000255|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tRNA(Ile)-lysidine synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=TILS_SOLUE
tRNA(Ile)-lysidine synthetase
13_1_40cm_2_scaffold_27611_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

8223..8849
DNA (627bp) protein (209aa)
FtsH peptidase; K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
ftsH; ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
hypothetical protein n=3 Tax=Aminicenantes RepID=UPI0003720079
Displaying 12 items

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