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13_1_40cm_2_scaffold_8198

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_8198_1
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(1..591)
DNA (591bp) protein (197aa)
Adenylate/guanylate cyclase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVE4_9BACT
LuxR family transcriptional regulator Tax=RBG_16_Chloroflexi_54_18_curated
regulatory protein, LuxR
13_1_40cm_2_scaffold_8198_2
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(779..1246)
DNA (468bp) protein (156aa)
Redoxin domain-containing protein n=1 Tax=uncultured Acidobacteria bacterium RepID=G8DPN0_9BACT
peroxiredoxin-like Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
13_1_40cm_2_scaffold_8198_3
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists

1291..2367
DNA (1077bp) protein (359aa)
pili retraction protein; K02669 twitching motility protein PilT Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
Twitching motility protein id=1955171 bin=GWB2_Nitrospirae_rel_47_37 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
pili retraction protein
13_1_40cm_2_scaffold_8198_4
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

2372..3538
DNA (1167bp) protein (389aa)
Pili retraction protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LRM4_SYNAS
pili retraction protein; K02669 twitching motility protein PilT Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
pili retraction protein
13_1_40cm_2_scaffold_8198_5
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

3535..3999
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YX03_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
response regulator receiver domain-containing protein
13_1_40cm_2_scaffold_8198_6
unknown

Not on your lists

comp(4002..4397)
DNA (396bp) protein (132aa)

This feature has no annotations

13_1_40cm_2_scaffold_8198_7
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(4798..5331)
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01U76_SOLUE
MoeA-like protein Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
molybdenum cofactor biosynthesis protein
13_1_40cm_2_scaffold_8198_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(5462..6253)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003687988
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
13_1_40cm_2_scaffold_8198_9
unknown

Not on your lists

comp(6250..6501)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_2_scaffold_8198_10
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

6541..6993
DNA (453bp) protein (151aa)
ribosomal protein-alanine acetyltransferase RimI-like protein; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
GCN5-related N-acetyltransferase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFE5_9BACT
ribosomal-protein-alanine acetyltransferase
13_1_40cm_2_scaffold_8198_11
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(6980..7756)
DNA (777bp) protein (259aa)
HIT domain protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2H3T0_9DELT
histidine triad (HIT) protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
histidine triad (HIT) protein
13_1_40cm_2_scaffold_8198_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(7776..8657)
DNA (882bp) protein (294aa)
Signal peptide peptidase A n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJ44_KORVE
signal peptide peptidase SppA
Signal peptide peptidase A {ECO:0000313|EMBL:ABF43106.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koriba
13_1_40cm_2_scaffold_8198_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


comp(8694..10436)
DNA (1743bp) protein (581aa)
rpsA; ribosomal protein S1; K02945 small subunit ribosomal protein S1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SSU ribosomal protein S1P; K02945 small subunit ribosomal protein S1 id=12555992 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S1
13_1_40cm_2_scaffold_8198_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists


10719..10925
DNA (207bp) protein (69aa)
LSU ribosomal protein L31P Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
50S ribosomal protein L31
50S ribosomal protein L31 id=14625930 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_2_scaffold_8198_15
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10922..11881
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M0L1_GEODF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM19048.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii
13_1_40cm_2_scaffold_8198_16
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

11878..12972
DNA (1095bp) protein (365aa)
Peptide chain release factor 1 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RF1_KORVE
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
prfA; peptide chain release factor 1
13_1_40cm_2_scaffold_8198_17
unknown

Not on your lists

comp(12849..13421)
DNA (573bp) protein (191aa)

This feature has no annotations

13_1_40cm_2_scaffold_8198_18
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

13429..13761
DNA (333bp) protein (111aa)
methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] id=24393954 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
prmA; 50S ribosomal protein L11 methyltransferase (EC:2.1.1.-)
13_1_40cm_2_scaffold_8198_19
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(13815..16019)
DNA (2205bp) protein (735aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MHX4_9BACT
peptidase M1 membrane alanine aminopeptidase Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
peptidase M1 membrane alanine aminopeptidase
13_1_40cm_2_scaffold_8198_20
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(16044..16982)
DNA (939bp) protein (313aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] id=12554122 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Displaying 20 items

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