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13_1_40cm_2_scaffold_2387

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2387_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2..916
DNA (915bp) protein (305aa)
glycerol-3-phosphate dehydrogenase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Glycerol-3-phosphate dehydrogenase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJP9_MYXFH
glycerol-3-phosphate dehydrogenase
13_1_40cm_2_scaffold_2387_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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964..1812
DNA (849bp) protein (283aa)
Putative cytochrome c n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z8_GEMAT
putative cytochrome c
Putative cytochrome c {ECO:0000313|EMBL:BAH38708.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27
13_1_40cm_2_scaffold_2387_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1839..2507
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIZ7_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60081.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
13_1_40cm_2_scaffold_2387_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2568..2996)
DNA (429bp) protein (143aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_2387_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(2993..3514)
DNA (522bp) protein (174aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_2387_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3521..4537)
DNA (1017bp) protein (339aa)
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
ddlA; D-alanine-D-alanine ligase (EC:6.3.2.4)
Protein containing D-alanine--D-alanine ligase n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5UAG9_9PLAN
13_1_40cm_2_scaffold_2387_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(4534..5913)
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036B8E91
major facilitator family transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MFS transporter
13_1_40cm_2_scaffold_2387_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(6020..7162)
DNA (1143bp) protein (381aa)
deoxyhypusine synthase-like protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
deoxyhypusine synthase-like protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] id=24490458 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
deoxyhypusine synthase-like protein
13_1_40cm_2_scaffold_2387_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(7168..7911)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM6_GEMAT
hypothetical protein; K06966 Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_40cm_2_scaffold_2387_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7868..9055)
DNA (1188bp) protein (396aa)
class V aminotransferase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
class V aminotransferase id=14632116 bin=bin9_gal15 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
class V aminotransferase
13_1_40cm_2_scaffold_2387_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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9078..9344
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABN2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_2387_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9389..10297
DNA (909bp) protein (303aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=14627129 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
iron-sulfur cluster binding protein, putative
13_1_40cm_2_scaffold_2387_13
unknown

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10294..10578
DNA (285bp) protein (95aa)

This feature has no annotations

13_1_40cm_2_scaffold_2387_14
unknown

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10799..11854
DNA (1056bp) protein (352aa)

This feature has no annotations

13_1_40cm_2_scaffold_2387_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

12094..12978
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC94_9ZZZZ
glutamyl peptidase Tax=GWC2_Gemmatimonadetes_71_10_curated
aminoacyl peptidase
13_1_40cm_2_scaffold_2387_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13103..14578)
DNA (1476bp) protein (492aa)
Peptidase M20 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHQ0_KORVE
peptidase M20 Tax=GWC2_Gemmatimonadetes_71_10_curated
peptidase M20
13_1_40cm_2_scaffold_2387_17
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

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comp(14638..15933)
DNA (1296bp) protein (432aa)
Predicted protein n=1 Tax=Nematostella vectensis RepID=A7T5N6_NEMVE
Predicted protein {ECO:0000313|EMBL:EDO42048.1}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (St
hypothetical protein
13_1_40cm_2_scaffold_2387_18
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15930..16562)
DNA (633bp) protein (211aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=2 Tax=Anaeromyxobacter RepID=B4UBD7_ANASK
two component sigma-54 specific Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACL65397.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterinea
Displaying 18 items

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