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13_1_40cm_2_scaffold_712

Search features with annotation key words

Displaying 30 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_712_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

2..220
DNA (219bp) protein (73aa)
TonB family protein
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_712_2
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222..1040
DNA (819bp) protein (273aa)
Uncharacterized protein {ECO:0000313|EMBL:KFX69131.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taean
13_1_40cm_2_scaffold_712_3
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1046..2122
DNA (1077bp) protein (359aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJ69_THEM7
sugar ABC transporter ATP-binding protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ADU52093.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae
13_1_40cm_2_scaffold_712_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

2119..3957
DNA (1839bp) protein (613aa)
binding-protein-dependent transporters inner membrane component; K02025 multiple sugar transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Permease component of ABC-type sugar transporter id=4522138 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
binding-protein-dependent transporters inner membrane component
13_1_40cm_2_scaffold_712_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

3976..4734
DNA (759bp) protein (253aa)
binding-protein-dependent transporters inner membrane component; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ABC-type sugar transport system, permease component id=4214566 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
sugar ABC transporter permease
13_1_40cm_2_scaffold_712_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4839..7484)
DNA (2646bp) protein (882aa)
Alpha-galactosidase-like protein; K07407 alpha-galactosidase [EC:3.2.1.22] Tax=GWC2_Gemmatimonadetes_71_10_curated
alpha-galactosidase n=1 Tax=Haladaptatus paucihalophilus RepID=UPI00035ED4C8
Alpha-galactosidase-like protein
13_1_40cm_2_scaffold_712_7
unknown

Not on your lists

7576..8133
DNA (558bp) protein (186aa)

This feature has no annotations

13_1_40cm_2_scaffold_712_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8146..9702
DNA (1557bp) protein (519aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A980_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PAS sensor protein
13_1_40cm_2_scaffold_712_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

9699..10367
DNA (669bp) protein (223aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A978_GEMAT
OmpR family two-component response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=GWC2_Gemmatimonadetes_71_10_curated
transcriptional regulator domain-containing protein
13_1_40cm_2_scaffold_712_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10369..11835
DNA (1467bp) protein (489aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A977_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ATP-binding region ATPase domain protein
13_1_40cm_2_scaffold_712_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11934..12578
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A828_GEMAT
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_2_scaffold_712_12
unknown

Not on your lists

12637..13410
DNA (774bp) protein (258aa)

This feature has no annotations

13_1_40cm_2_scaffold_712_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13422..14453
DNA (1032bp) protein (344aa)
TonB family protein
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_2_scaffold_712_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14537..15217
DNA (681bp) protein (227aa)
Putative TonB protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A976_GEMAT
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RBG_16_Gemmatimonadetes_66_8_curated
TonB family protein
13_1_40cm_2_scaffold_712_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15245..15988
DNA (744bp) protein (248aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A975_GEMAT
putative biopolymer transport protein; K03562 biopolymer transport protein TolQ Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
MotA/TolQ/ExbB proton channel
13_1_40cm_2_scaffold_712_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15969..16436
DNA (468bp) protein (156aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A974_GEMAT
putative biopolymer transport protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Biopolymer transport protein ExbD/TolR
13_1_40cm_2_scaffold_712_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16440..16865
DNA (426bp) protein (142aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A973_GEMAT
putative biopolymer transport protein; K03559 biopolymer transport protein ExbD Tax=GWC2_Gemmatimonadetes_71_10_curated
Biopolymer transport protein ExbD/TolR
13_1_40cm_2_scaffold_712_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17047..17694
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A972_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39049.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_2_scaffold_712_19
unknown

Not on your lists

17756..17887
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_2_scaffold_712_20
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(17910..18308)
DNA (399bp) protein (133aa)
Uncharacterized protein {ECO:0000313|EMBL:KJU81904.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bav
13_1_40cm_2_scaffold_712_21
unknown

Not on your lists

comp(18840..18965)
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_2_scaffold_712_22
GWA2_OD1_45_21, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(19059..19457)
DNA (399bp) protein (133aa)
hypothetical protein Tax=GWA2_OD1_45_21
13_1_40cm_2_scaffold_712_23
unknown

Not on your lists

comp(19470..19628)
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_2_scaffold_712_24
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19709..19819
DNA (111bp) protein (37aa)
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
vacuolar-type H(+)-translocating pyrophosphatase (EC:3.6.1.1); K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=GWD2_Deltaproteobacteria_55_8_curated
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDJ7_THET1
13_1_40cm_2_scaffold_712_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

19893..21368
DNA (1476bp) protein (492aa)
amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Amino acid permease-associated region id=3114221 bin=GWA2_Ignavibacteria_55_11 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
putative permease
13_1_40cm_2_scaffold_712_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21378..22640)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000363B281 rbh
sodium:dicarboxylate symporter
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:AHG91148.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_712_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22683..23588)
DNA (906bp) protein (302aa)
Putative N-acetylglucosamine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A969_GEMAT
ATPase BadF/BadG/BcrA/BcrD type
ATPase BadF/BadG/BcrA/BcrD type {ECO:0000313|EMBL:AHG91146.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_2_scaffold_712_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(23588..25036)
DNA (1449bp) protein (483aa)
Putative sodium/solute symporter n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A968_GEMAT
putative sodium/solute symporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
SSS sodium solute transporter superfamily
13_1_40cm_2_scaffold_712_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25118..25486)
DNA (369bp) protein (123aa)
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A966_GEMAT
erpA; putative iron-sulfur cluster insertion protein ErpA Tax=RBG_16_Gemmatimonadetes_66_8_curated
iron-sulfur cluster assembly accessory protein
13_1_40cm_2_scaffold_712_30
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(25511..26689)
DNA (1179bp) protein (393aa)
Glr3452 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NFS2_GLOVI
hypothetical protein
Glr3452 protein {ECO:0000313|EMBL:BAC91393.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
Displaying 30 items

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